RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 PDCD5O14737 125 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 PTBP3O95758 552 aaKnown RBP13.7□□□□□ -0.22
VHL-203ENST00000477538 HPXP02790 462 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 SDC2P34741 201 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 GATA4P43694 442 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 HAAOP46952 286 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 KISS1Q15726 138 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 MPPED2Q15777 294 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 RNF144BQ7Z419 303 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 ZNF573Q86YE8 665 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 JAGN1Q8N5M9 183 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 SCCPDHQ8NBX0 429 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 NEU4Q8WWR8 484 aaPredicted RBP13.7□□□□□ -0.22
VHL-203ENST00000477538 GPER1Q99527 375 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 BCL7BQ9BQE9 202 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 RBM38Q9H0Z9 239 aaKnown RBP13.7□□□□□ -0.22
VHL-203ENST00000477538 OR51I2Q9H344 312 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 UFSP2Q9NUQ7 469 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 AK6Q9Y3D8 172 aaKnown RBP13.7□□□□□ -0.22
VHL-203ENST00000477538 DPPA5A6NC42 116 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 TRIM64BA6NI03 449 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 CDRT1O95170 752 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 RAB3BP20337 219 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 ZNF93P35789 620 aaPredicted RBP13.69□□□□□ -0.22
VHL-203ENST00000477538 POU3F4P49335 361 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 GLT8D1Q68CQ7 371 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 HAGHLQ6PII5 290 aaPredicted RBP13.69□□□□□ -0.22
VHL-203ENST00000477538 CRIP3Q6Q6R5 217 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 MOGAT3Q86VF5 341 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 TPRA1Q86W33 373 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 ANGPTL5Q86XS5 388 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 CALHM1Q8IU99 346 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 ZNF420Q8TAQ5 688 aaPredicted RBP13.69□□□□□ -0.22
VHL-203ENST00000477538 ISOC1Q96CN7 298 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 GFI1Q99684 422 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 NKX3-1Q99801 234 aaPredicted RBP13.69□□□□□ -0.22
VHL-203ENST00000477538 TLNRD1Q9H1K6 362 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 METTL17Q9H7H0 456 aaPredicted RBP13.69□□□□□ -0.22
VHL-203ENST00000477538 FN3KRPQ9HA64 309 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 PPP1R3CQ9UQK1 317 aa13.69□□□□□ -0.22
VHL-203ENST00000477538 SMIM31A0A1B0GVY4 71 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 SMIM30A4D0T7 59 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 J3QT63 122 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 NDUFS7O75251 213 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 PLATP00750 562 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 DNASE1P24855 282 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 SERPINB10P48595 397 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 MXD1Q05195 221 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 CDH26Q8IXH8 852 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 C11orf53Q8IXP5 236 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 PNLDC1Q8NA58 520 aaKnown RBP13.68□□□□□ -0.22
VHL-203ENST00000477538 OR5D18Q8NGL1 313 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 ERGIC1Q969X5 290 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 FOXRED1Q96CU9 486 aaPredicted RBP13.68□□□□□ -0.22
VHL-203ENST00000477538 LURAP1Q96LR2 239 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 GCM1Q9NP62 436 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 ZNF701Q9NV72 531 aaPredicted RBP13.68□□□□□ -0.22
VHL-203ENST00000477538 C1orf123Q9NWV4 160 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 NDUFA13Q9P0J0 144 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 V9GY05 133 aa13.68□□□□□ -0.22
VHL-203ENST00000477538 ITPR2Q14571 2701 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 IGHV1-69-2A0A0G2JMI3 117 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 hCG_1807616A0A1W2PRN6 198 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 H3BMQ9 156 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 CDIPTO14735 213 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 SLC22A1O15245 554 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 SYNGR1O43759 233 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 CDC14BO60729 498 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 LY6HO94772 140 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 F12P00748 615 aaPredicted RBP13.67□□□□□ -0.22
VHL-203ENST00000477538 IL1AP01583 271 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 CLEC2LP0C7M8 214 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 PTH2RP49190 550 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 PSMD7P51665 324 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 EFNA4P52798 201 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 OR10A3P58181 314 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 ZP1P60852 638 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 ZNF826PQ6ZT77 177 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 USP43Q70EL4 1123 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 SLC25A26Q70HW3 274 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 LYPD6Q86Y78 171 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 OR11L1Q8NGX0 322 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 Q8TCH9 128 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 AQP3Q92482 292 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 UQCC2Q9BRT2 126 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 PKIBQ9C010 78 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 FAM192AQ9GZU8 254 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 TREM2Q9NZC2 230 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 NBPF19A0A087WUL8 3843 aa13.67□□□□□ -0.22
VHL-203ENST00000477538 SPRY1O43609 319 aaPredicted RBP13.66□□□□□ -0.22
VHL-203ENST00000477538 RHBDL1O75783 438 aa13.66□□□□□ -0.22
VHL-203ENST00000477538 IGHV4-39P01824 125 aa13.66□□□□□ -0.22
VHL-203ENST00000477538 TMEM225BP0DP42 221 aa13.66□□□□□ -0.22
VHL-203ENST00000477538 CD37P11049 281 aa13.66□□□□□ -0.22
VHL-203ENST00000477538 DAOP14920 347 aa13.66□□□□□ -0.22
VHL-203ENST00000477538 PAX1P15863 534 aa13.66□□□□□ -0.22
VHL-203ENST00000477538 MPZP25189 248 aa13.66□□□□□ -0.22
VHL-203ENST00000477538 RPS19P39019 145 aaKnown RBP13.66□□□□□ -0.22
VHL-203ENST00000477538 PMELP40967 661 aa13.66□□□□□ -0.22
VHL-203ENST00000477538 OR3A4PP47883 348 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms