RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 HMGXB4Q9UGU5 601 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 VAX2Q9UIW0 290 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 RHBDD3Q9Y3P4 386 aa1.53□□□□□ -2.16
TARDBP-208ENST00000477447 TRIP11Q15643 1979 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 COL5A1P20908 1838 aaPredicted RBP1.52□□□□□ -2.17
TARDBP-208ENST00000477447 SCN4AP35499 1836 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 WDR19Q8NEZ3 1342 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 TRAV8-4A0A0B4J246 113 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 IZUMO1RA6ND01 250 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 GOLGA6L4A6NEF3 574 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 ZNF99A8MXY4 864 aaPredicted RBP1.52□□□□□ -2.17
TARDBP-208ENST00000477447 FAM25EA8MYX2 175 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 DFFAO00273 331 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 PTTG1O95997 202 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 P01737 135 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 SLC35G6P0C7Q6 338 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 STAG3L3P0CL85 134 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 TUBG1P23258 451 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 RGS6P49758 472 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 MTPNP58546 118 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 LCN2P80188 198 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 RPL18AQ02543 176 aaKnown RBP1.52□□□□□ -2.17
TARDBP-208ENST00000477447 ATP5G2Q06055 141 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 BIKQ13323 160 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 HIKESHIQ53FT3 197 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 FAM104BQ5XKR9 115 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 TTC19Q6DKK2 380 aaPredicted RBP1.52□□□□□ -2.17
TARDBP-208ENST00000477447 APOBEC3HQ6NTF7 200 aaKnown RBP1.52□□□□□ -2.17
TARDBP-208ENST00000477447 OTUD6AQ7L8S5 288 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 NT5DC3Q86UY8 548 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 SLC7A5P1Q8MH63 180 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 DAW1Q8N136 415 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 ZCCHC24Q8N2G6 241 aaKnown RBP1.52□□□□□ -2.17
TARDBP-208ENST00000477447 RNF10Q8N5U6 811 aaKnown RBP1.52□□□□□ -2.17
TARDBP-208ENST00000477447 OR2M7Q8NG81 312 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 OR4C13Q8NGP0 309 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 TMEM234Q8WY98 164 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 MRPL48Q96GC5 212 aaKnown RBP1.52□□□□□ -2.17
TARDBP-208ENST00000477447 ANP32EQ9BTT0 268 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 STMN4Q9H169 189 aaPredicted RBP1.52□□□□□ -2.17
TARDBP-208ENST00000477447 OR2AG1Q9H205 316 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 TRIM45Q9H8W5 580 aaPredicted RBP1.52□□□□□ -2.17
TARDBP-208ENST00000477447 ZNF302Q9NR11 478 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 TUBG2Q9NRH3 451 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 R4GN34 69 aa1.52□□□□□ -2.17
TARDBP-208ENST00000477447 TMEM94Q12767 1356 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 NCF1BA6NI72 391 aaPredicted RBP1.51□□□□□ -2.17
TARDBP-208ENST00000477447 CENPXA8MT69 81 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 NCF1CA8MVU1 366 aaPredicted RBP1.51□□□□□ -2.17
TARDBP-208ENST00000477447 SMC2O95347 1197 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 FSTL3O95633 263 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 KLK1P06870 262 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 OR5AC1P0C628 307 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 RALBP11234 206 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 GZMAP12544 262 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 HLA-GP17693 338 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 LGALS3P17931 250 aaKnown RBP1.51□□□□□ -2.17
TARDBP-208ENST00000477447 ACOT2P49753 483 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 CLDN8P56748 225 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 OR12D2P58182 307 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 TAS2R39P59534 338 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 KRTAP12-3P60328 96 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 LAMTOR4Q0VGL1 99 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 TMED1Q13445 227 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 LIN9Q5TKA1 542 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 ZFAND6Q6FIF0 208 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 C16orf87Q6PH81 154 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 TRMT10CQ7L0Y3 403 aaKnown RBP1.51□□□□□ -2.17
TARDBP-208ENST00000477447 MRPL21Q7Z2W9 205 aaKnown RBP1.51□□□□□ -2.17
TARDBP-208ENST00000477447 OR4D6Q8NGJ1 314 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 OR10Z1Q8NGY1 313 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 BAALCQ8WXS3 180 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 RBPMSQ93062 196 aaKnown RBP1.51□□□□□ -2.17
TARDBP-208ENST00000477447 ISG20Q96AZ6 181 aaKnown RBP1.51□□□□□ -2.17
TARDBP-208ENST00000477447 DERL3Q96Q80 235 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 GABRG3Q99928 467 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 BLZF1Q9H2G9 400 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 OR2S2Q9NQN1 319 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 CHRAC1Q9NRG0 131 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 INIPQ9NRY2 104 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 STX18Q9P2W9 335 aaKnown RBP1.51□□□□□ -2.17
TARDBP-208ENST00000477447 RABL2AQ9UBK7 228 aaPredicted RBP1.51□□□□□ -2.17
TARDBP-208ENST00000477447 ZMAT5Q9UDW3 170 aaKnown RBP1.51□□□□□ -2.17
TARDBP-208ENST00000477447 KLF12Q9Y4X4 402 aa1.51□□□□□ -2.17
TARDBP-208ENST00000477447 ZNF608Q9ULD9 1512 aaPredicted RBP1.5□□□□□ -2.17
TARDBP-208ENST00000477447 TRIOBPQ9H2D6 2365 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 JCADQ9P266 1359 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 TTC41PQ6P2S7 1318 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 A0A1B0GTQ1 180 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 C4orf51C9J302 202 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 J3QT63 122 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 KCNK2O95069 426 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 CXorf1O96002 111 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 SEC11BP0C7V7 166 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 ANP32AP39687 249 aaKnown RBP1.5□□□□□ -2.17
TARDBP-208ENST00000477447 PSMB2P49721 201 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 FMODQ06828 376 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 TRDNQ13061 729 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 HSP90B2PQ58FF3 399 aa1.5□□□□□ -2.17
TARDBP-208ENST00000477447 ZNF660Q6AZW8 331 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms