RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SMIM3Q9BZL3 60 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 GON4LQ3T8J9 2241 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 CACNA1IQ9P0X4 2223 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 A0A1B0GWJ7 208 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 A6NCN8 305 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 K7N7A8 449 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 LMX1BO60663 402 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 H2BFMP0C1H6 154 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 RNH1P13489 461 aaKnown RBP13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 PI3P19957 117 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 PTGER4P35408 488 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 RELQ04864 619 aaPredicted RBP13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 EIF3IQ13347 325 aaKnown RBP13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 ARL6IP1Q15041 203 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 NNATQ16517 81 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 KHDC3LQ587J8 217 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 CLEC9AQ6UXN8 241 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 OR2I1PQ8NGU4 316 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 NEU1Q99519 415 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 OR10A5Q9H207 317 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 EHFQ9NZC4 300 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 ZDHHC8Q9ULC8 765 aa13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 MRPS28Q9Y2Q9 187 aaKnown RBP13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 LSM5Q9Y4Y9 91 aaKnown RBP13.46□□□□□ -0.25
CLSTN1-205ENST00000477264 VCANP13611 3396 aa13.46□□□□□ -0.26
CLSTN1-205ENST00000477264 TDRD6O60522 2096 aaKnown RBP13.46□□□□□ -0.26
CLSTN1-205ENST00000477264 A0A0A6YYD4 124 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 FAM221BA6H8Z2 402 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 A6NIZ1 184 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 CDC14BO60729 498 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 IL33O95760 270 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 PDGFBP01127 241 aaPredicted RBP13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 BCKDHBP21953 392 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 RAP1BP61224 184 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 PPA1Q15181 289 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 ZNF761Q86XN6 746 aaPredicted RBP13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 DMRTC2Q8IXT2 367 aaPredicted RBP13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 SLC26A10Q8NG04 563 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 Q8WTZ3 238 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 ERGIC1Q969X5 290 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 FOXN4Q96NZ1 517 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 ARHGEF17Q96PE2 2063 aaPredicted RBP13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 NICN1Q9BSH3 213 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 MOB1AQ9H8S9 216 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 MMP24Q9Y5R2 645 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 FREM3P0C091 2139 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 ABCA7Q8IZY2 2146 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 A0A0J9YY10 115 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 A0A1W2PR77 199 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 B4DEV8 164 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 MASP2O00187 686 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 CA11O75493 328 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 DXOO77932 396 aaKnown RBP13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 MPIG6BO95866 241 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 CTSDP07339 412 aaPredicted RBP13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 GLRA1P23415 457 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 GALNSP34059 522 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 TAGLN2P37802 199 aaKnown RBP13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 UBE2KP61086 200 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 LSM6P62312 80 aaKnown RBP13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 CSNK2A1P68400 391 aaPredicted RBP13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 C1orf61Q13536 156 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 ARFRP1Q13795 201 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 IL13RA2Q14627 380 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 PLAC9Q5JTB6 97 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 SPNS3Q6ZMD2 512 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 TTLL10Q6ZVT0 673 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 CSNK2A3Q8NEV1 391 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 RAB39BQ96DA2 213 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 FAM206AQ9NX38 181 aa13.45□□□□□ -0.26
CLSTN1-205ENST00000477264 CCDC163A0A0D9SF12 145 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 KIR2DS5A0A0G2JLQ3 304 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 A0A0G2JNG1 304 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 H3BQ15 152 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 KIR2DS3K7RE56 304 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 HRKO00198 91 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 ZNF20P17024 532 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 FGF7P21781 194 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 KIR2DS5Q14953 304 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 GGNBP1Q5YKI7 109 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 KLHL24Q6TFL4 600 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 CBLN3Q6UW01 205 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 BEND2Q8NDZ0 799 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 OR10G6Q8NH81 332 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 RNF133Q8WVZ7 376 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 HPSE2Q8WWQ2 592 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 ADAT3Q96EY9 351 aaPredicted RBP13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 PARP12Q9H0J9 701 aaKnown RBP13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 KIAA1456Q9P272 454 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 KCNIP3Q9Y2W7 256 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 CRYM-AS1A6NIL9 109 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 RRP8O43159 456 aaKnown RBP13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 UTS2O95399 124 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 TTRP02766 147 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 HEXBP07686 556 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 CELA2BP08218 269 aaPredicted RBP13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 SOD3P08294 240 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 HOXA6P31267 233 aa13.44□□□□□ -0.26
CLSTN1-205ENST00000477264 GLIPR1L1Q6UWM5 242 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms