RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 DUX4L6P0CJ89 424 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 DUX4L7P0CJ90 424 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 DCKP27707 260 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 C21orf33P30042 268 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-208ENST00000476739 GMFBP60983 142 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 LCN2P80188 198 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 MZT1Q08AG7 82 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 ST3GAL4Q11206 333 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 ALKBH1Q13686 389 aaKnown RBP8.1□□□□□ -1.11
HDAC3-208ENST00000476739 CR1LQ2VPA4 569 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 FAM120AOSQ5T036 256 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 ZBTB37Q5TC79 503 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 C16orf87Q6PH81 154 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 DUX4L9Q6RFH8 374 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-208ENST00000476739 IZUMO2Q6UXV1 221 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 FAM90A1Q86YD7 464 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 C1orf87Q8N0U7 546 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 MUC20Q8N307 709 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-208ENST00000476739 KLHL36Q8N4N3 616 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 SPICQ8N5J4 248 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 OR51F2Q8NH61 342 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 SGCDQ92629 289 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 TMEM186Q96B77 213 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 ADAT3Q96EY9 351 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-208ENST00000476739 TMEM80Q96HE8 168 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 WDR13Q9H1Z4 485 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 OR51I2Q9H344 312 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 MMP26Q9NRE1 261 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 FKBP14Q9NWM8 211 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 HIF1ANQ9NWT6 349 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 CTSZQ9UBR2 303 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 DUX4Q9UBX2 424 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 PSORS1C1Q9UIG5 152 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 KCNS2Q9ULS6 477 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 DIMT1Q9UNQ2 313 aaKnown RBP8.1□□□□□ -1.11
HDAC3-208ENST00000476739 PCDHGB5Q9Y5G0 923 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 SIRT4Q9Y6E7 314 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-208ENST00000476739 NSD1Q96L73 2696 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-208ENST00000476739 CUBNO60494 3623 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 PQLC2LA1A4F0 135 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 ANKRD61A6NGH8 418 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 OOEPA6NGQ2 149 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 TMEM210A6NLX4 147 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 DHRS7CA6NNS2 312 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 SRRM5B3KS81 715 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 TRAPPC2LH3BP13 241 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 LGALS8O00214 317 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 PHF1O43189 567 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-208ENST00000476739 AKR7A2O43488 359 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 FSTL3O95633 263 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 GYPAP02724 150 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 ISG15P05161 165 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 UBCP0CG48 685 aaKnown RBP8.09□□□□□ -1.11
HDAC3-208ENST00000476739 RPS2P15880 293 aaKnown RBP8.09□□□□□ -1.11
HDAC3-208ENST00000476739 AMY2BP19961 511 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 CCR9P51686 369 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 DVL1P1P54792 670 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-208ENST00000476739 GNG3P63215 75 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 UBE2V2Q15819 145 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 CLVS2Q5SYC1 327 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 C6orf141Q5SZD1 244 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 TMEM244Q5VVB8 128 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 TEX36Q5VZQ5 186 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 HAGHLQ6PII5 290 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-208ENST00000476739 ZNF841Q6ZN19 808 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 AHSA2Q719I0 299 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 RNF144BQ7Z419 303 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 BATF2Q8N1L9 274 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 FGFRL1Q8N441 504 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 ZNF485Q8NCK3 441 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 OR5A2Q8NGI9 324 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 TRMT10AQ8TBZ6 339 aaKnown RBP8.09□□□□□ -1.11
HDAC3-208ENST00000476739 NPRL2Q8WTW4 380 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 GATAD2BQ8WXI9 593 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 RGP1Q92546 391 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-208ENST00000476739 HIST1H2AAQ96QV6 131 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 PDCD1LG2Q9BQ51 273 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 PLEKHA1Q9HB21 404 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 ABCB9Q9NP78 766 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 PLCXD1Q9NUJ7 323 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 TMEM160Q9NX00 188 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 ERVK-18Q9QC07 812 aa8.09□□□□□ -1.11
HDAC3-208ENST00000476739 DOCK11Q5JSL3 2073 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 IGKV1-27A0A075B6S5 117 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 IGKV1-9A0A0C4DH69 117 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 IRGMA1A4Y4 181 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 OR5B21A6NL26 309 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 SLC1A7O00341 560 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 SYNGR1O43759 233 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 PIPP12273 146 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-208ENST00000476739 MYF6P23409 242 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 CFHR2P36980 270 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 HAAOP46952 286 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 TGM4P49221 684 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 GBX2P52951 348 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-208ENST00000476739 RIPPLY3P57055 190 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 FAHD2BQ6P2I3 314 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-208ENST00000476739 DCDC5Q6ZRR9 648 aa8.08□□□□□ -1.12
HDAC3-208ENST00000476739 C1orf229Q6ZS94 237 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-208ENST00000476739 GLCCI1Q86VQ1 547 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms