RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 TRBV5-5A0A0J9YX44 114 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 ZNF732B4DXR9 585 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 LGALS8O00214 317 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 CDIPTO14735 213 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 RGS10O43665 173 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 IRF2P14316 349 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 GPM6AP51674 278 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 GABARAPL2P60520 117 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 CYB5R2Q6BCY4 276 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 CLEC9AQ6UXN8 241 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 MOB3CQ70IA8 216 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 ZNF573Q86YE8 665 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 AQP3Q92482 292 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 GHSRQ92847 366 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 FGGYQ96C11 551 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 TMEM246Q9BRR3 403 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 PKIBQ9C010 78 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 ISYNA1Q9NPH2 558 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 GPR173Q9NS66 373 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 BLOC1S6Q9UL45 172 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 ZNF281Q9Y2X9 895 aa14.18□□□□□ -0.14
SCAF11-206ENST00000474828 TLN2Q9Y4G6 2542 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 A6NIN4 97 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 A8MXK9 166 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 MYL12BO14950 172 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 GPX5O75715 221 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 SERPINA3P01011 423 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 WNT2P09544 360 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 MUC1P15941 1255 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-206ENST00000474828 FUT6P51993 359 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 GPR50Q13585 617 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 SPHARQ15513 63 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 YIF1BQ5BJH7 314 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 FAM201AQ5SY85 155 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 ASPHD2Q6ICH7 369 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 CRIP3Q6Q6R5 217 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 DCDC5Q6ZRR9 648 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 GPR148Q8TDV2 347 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 RPL3LQ92901 407 aaKnown RBP14.17□□□□□ -0.14
SCAF11-206ENST00000474828 SPSB1Q96BD6 273 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 C12orf43Q96C57 262 aaKnown RBP14.17□□□□□ -0.14
SCAF11-206ENST00000474828 RAB39BQ96DA2 213 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 OCEL1Q9H607 264 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 TMEM160Q9NX00 188 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 KAAG1Q9UBP8 84 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 LRRC42Q9Y546 428 aa14.17□□□□□ -0.14
SCAF11-206ENST00000474828 ABCA1O95477 2261 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 IGKV1-27A0A075B6S5 117 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 PPIAL4CA0A0B4J2A2 164 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 OOEPA6NGQ2 149 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 CEACAM18A8MTB9 384 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 B4DSR2 109 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 FAM157AC9JC47 383 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 J3QT63 122 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 NDUFA2O43678 99 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 EGR1P18146 543 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 ATF1P18846 271 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 ERVK11-1P61568 191 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 CNN3Q15417 329 aaKnown RBP14.16□□□□□ -0.14
SCAF11-206ENST00000474828 ATPAF1Q5TC12 328 aaPredicted RBP14.16□□□□□ -0.14
SCAF11-206ENST00000474828 SERPINA12Q8IW75 414 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 LINC01356Q8N9X3 169 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 OR13C3Q8NGS6 347 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 OR5M11Q96RB7 305 aa14.16□□□□□ -0.14
SCAF11-206ENST00000474828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.16□□□□□ -0.142e-6■■■■■ 35
SCAF11-206ENST00000474828 NIPBLQ6KC79 2804 aaeCLIP14.16□□□□□ -0.142e-6■■■■■ 44.5
SCAF11-206ENST00000474828 SVEP1Q4LDE5 3571 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 TRAV38-1A0A0B4J264 116 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 A6NLC8 198 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 PGA5P0DJD9 388 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 PRKACBP22694 351 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 DVL1P1P54792 670 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-206ENST00000474828 HOXA4Q00056 320 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-206ENST00000474828 IL24Q13007 206 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 TPBGQ13641 420 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 TBCEQ15813 527 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-206ENST00000474828 KCNJ8Q15842 424 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 DMRTC1Q5HYR2 192 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 ZNF841Q6ZN19 808 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 FAM90A1Q86YD7 464 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 CALHM1Q8IU99 346 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 POC1AQ8NBT0 407 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 OR5D14Q8NGL3 314 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 LRRC29Q8WV35 223 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 DACT3Q96B18 629 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-206ENST00000474828 GAL3ST1Q99999 423 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 DNTTIP1Q9H147 329 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 ZCCHC4Q9H5U6 513 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 METTL17Q9H7H0 456 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-206ENST00000474828 HES4Q9HCC6 221 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 RASL12Q9NYN1 266 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 MIOXQ9UGB7 285 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 SLC7A11Q9UPY5 501 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 DHDHQ9UQ10 334 aa14.15□□□□□ -0.14
SCAF11-206ENST00000474828 TRBV5-7A0A0A0MS05 114 aa14.14□□□□□ -0.15
SCAF11-206ENST00000474828 H3BSH0 61 aa14.14□□□□□ -0.15
SCAF11-206ENST00000474828 RHBDL1O75783 438 aa14.14□□□□□ -0.15
SCAF11-206ENST00000474828 SC5DO75845 299 aa14.14□□□□□ -0.15
SCAF11-206ENST00000474828 ZNF20P17024 532 aa14.14□□□□□ -0.15
SCAF11-206ENST00000474828 RBP2P50120 134 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms