RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 A0A1B0GVI7 797 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 A0A1B0GWJ7 208 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 J3QLW9 94 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 LGALS8O00214 317 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 P2RY10O00398 339 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 NDUFA2O43678 99 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 FSTL3O95633 263 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 IGHA1P01876 353 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 TTRP02766 147 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 HKR1P10072 659 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 ATP6V1B1P15313 513 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 ZNF19P17023 458 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 ACKR3P25106 362 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 PSMB10P40306 273 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 PMELP40967 661 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 ACTA2P62736 377 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 ACTG2P63267 376 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 RIPPLY1Q0D2K3 151 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 PRDX4Q13162 271 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 WDR25Q64LD2 544 aaPredicted RBP12.6□□□□□ -0.39
VARS-223ENST00000474643 LAIR2Q6ISS4 152 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 LYPD2Q6UXB3 125 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 ZDHHC23Q8IYP9 409 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 ELMOD2Q8IZ81 293 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 PNLDC1Q8NA58 520 aaKnown RBP12.6□□□□□ -0.39
VARS-223ENST00000474643 PLPP7Q8NBV4 271 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 UPRTQ96BW1 309 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 ACOXLQ9NUZ1 547 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 PSORS1C1Q9UIG5 152 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 SLC22A13Q9Y226 551 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 PIGLQ9Y2B2 252 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 DOCK11Q5JSL3 2073 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 KIR2DS1A0A191URI9 304 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 OOEPA6NGQ2 149 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 H3BSH0 61 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 DHRS3O75911 302 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 CRYBA1P05813 215 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 RNASE1P07998 156 aaKnown RBP12.59□□□□□ -0.39
VARS-223ENST00000474643 HTR1AP08908 422 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 FGF12P61328 243 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 METTL11BQ5VVY1 283 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 SHISA2Q6UWI4 295 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 BRD3OSQ6XYD6 125 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 MOB3CQ70IA8 216 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 KCTD20Q7Z5Y7 419 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 LHFPL3Q86UP9 236 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 CATSPERDQ86XM0 798 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 HAVCR2Q8TDQ0 301 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 MYDGFQ969H8 173 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 RNF170Q96K19 258 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 ALG8Q9BVK2 526 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 DUSP21Q9H596 190 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 PLEKHA1Q9HB21 404 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 TNFRSF19Q9NS68 423 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 ENPP5Q9UJA9 477 aa12.59□□□□□ -0.39
VARS-223ENST00000474643 DIMT1Q9UNQ2 313 aaKnown RBP12.59□□□□□ -0.39
VARS-223ENST00000474643 SLC1A7O00341 560 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 TMPRSS2O15393 492 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 SYT7O43581 403 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 SRSF10O75494 262 aaKnown RBP12.58□□□□□ -0.4
VARS-223ENST00000474643 TOX4O94842 621 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 CST4P01036 141 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 GYPAP02724 150 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 LIPFP07098 398 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 FAHP16930 419 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 CRHBPP24387 322 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 OR12D2P58182 307 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 GABARAPL2P60520 117 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 IL13RA1P78552 427 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 GALEQ14376 348 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 SMN1Q16637 294 aaKnown RBP12.58□□□□□ -0.4
VARS-223ENST00000474643 CDONQ4KMG0 1287 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 CEP78Q5JTW2 689 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 ZNF684Q5T5D7 378 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 PLCXD3Q63HM9 321 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 OR52I1Q8NGK6 324 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 RORBQ92753 470 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 ITFG2Q969R8 447 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 C4orf36Q96KX1 117 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 PPP1R3EQ9H7J1 279 aa12.58□□□□□ -0.4
VARS-223ENST00000474643 BPIFB3P59826 476 aa12.57□□□□□ -0.4
VARS-223ENST00000474643 SLC35A2P78381 396 aa12.57□□□□□ -0.4
VARS-223ENST00000474643 MRPL28Q13084 256 aaKnown RBP12.57□□□□□ -0.4
VARS-223ENST00000474643 MICBQ29980 383 aa12.57□□□□□ -0.4
VARS-223ENST00000474643 WDR38Q5JTN6 314 aa12.57□□□□□ -0.4
VARS-223ENST00000474643 ZNF826PQ6ZT77 177 aa12.57□□□□□ -0.4
VARS-223ENST00000474643 BPIFB6Q8NFQ5 453 aa12.57□□□□□ -0.4
VARS-223ENST00000474643 OR1M1Q8NGA1 313 aa12.57□□□□□ -0.4
VARS-223ENST00000474643 ST8SIA4Q92187 359 aa12.57□□□□□ -0.4
VARS-223ENST00000474643 GGHQ92820 318 aa12.57□□□□□ -0.4
VARS-223ENST00000474643 TMEM80Q96HE8 168 aa12.57□□□□□ -0.4
VARS-223ENST00000474643 ZNF48Q96MX3 618 aaPredicted RBP12.57□□□□□ -0.4
VARS-223ENST00000474643 NR1H4Q96RI1 486 aaPredicted RBP12.57□□□□□ -0.4
VARS-223ENST00000474643 UNKLQ9H9P5 680 aaKnown RBP12.57□□□□□ -0.4
VARS-223ENST00000474643 CHCHD3Q9NX63 227 aaKnown RBP12.57□□□□□ -0.4
VARS-223ENST00000474643 MYRFQ9Y2G1 1151 aa12.57□□□□□ -0.4
VARS-223ENST00000474643 EXOSC1Q9Y3B2 195 aaKnown RBP12.57□□□□□ -0.4
VARS-223ENST00000474643 TMEM210A6NLX4 147 aa12.56□□□□□ -0.4
VARS-223ENST00000474643 HOXA3O43365 443 aaPredicted RBP12.56□□□□□ -0.4
VARS-223ENST00000474643 NRASP01111 189 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms