RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 SNRPGP62308 76 aaKnown RBP12.92□□□□□ -0.34
MRPL55-226ENST00000473066 PDCD1Q15116 288 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 SMIM21Q3B7S5 101 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 ZBTB49Q6ZSB9 765 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 C9orf139Q6ZV77 190 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 KRT74Q7RTS7 529 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 CATSPERDQ86XM0 798 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 BCL6BQ8N143 479 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-226ENST00000473066 ZDHHC22Q8N966 263 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 ZDHHC16Q969W1 377 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 SEH1LQ96EE3 360 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 RNFT2Q96EX2 444 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 WDFY2Q96P53 400 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 WDR13Q9H1Z4 485 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 ESM1Q9NQ30 184 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 ONECUT1Q9UBC0 465 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 RPUSD1Q9UJJ7 312 aaKnown RBP12.92□□□□□ -0.34
MRPL55-226ENST00000473066 SLC7A11Q9UPY5 501 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 SLC22A13Q9Y226 551 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 PCDHGB1Q9Y5G3 927 aa12.92□□□□□ -0.34
MRPL55-226ENST00000473066 A0A1B0GW55 424 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 DAPL1A0PJW8 107 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 OR2AT4A6NND4 320 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 J3QT63 122 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 MPZL2O60487 215 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 RHBDL1O75783 438 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 GATBO75879 557 aaKnown RBP12.91□□□□□ -0.34
MRPL55-226ENST00000473066 BAG2O95816 211 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 SFTPBP07988 381 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 DUX4L2P0CJ85 424 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 DUX4L3P0CJ86 424 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 DUX4L4P0CJ87 422 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 DUX4L5P0CJ88 424 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 DUX4L6P0CJ89 424 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 DUX4L7P0CJ90 424 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 PRTN3P24158 256 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 HAAOP46952 286 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 ARF6P62330 175 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 OCLNQ16625 522 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 TP53I3Q53FA7 332 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 DMRTC1Q5HYR2 192 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 ATPAF1Q5TC12 328 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-226ENST00000473066 DUX4L9Q6RFH8 374 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-226ENST00000473066 BRD3OSQ6XYD6 125 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 OR14K1Q8NGZ2 314 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 GATAD2BQ8WXI9 593 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 AQP3Q92482 292 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 SLC25A28Q96A46 364 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 ACOXLQ9NUZ1 547 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 DUX4Q9UBX2 424 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 SLC25A10Q9UBX3 287 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-226ENST00000473066 KPTNQ9Y664 436 aa12.91□□□□□ -0.34
MRPL55-226ENST00000473066 A0A1B0GTI1 187 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 LOC107986453A0A1B0GWG9 222 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 ANKRD61A6NGH8 418 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 H3BSH0 61 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 NDUFB7P17568 137 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 CCL1P22362 96 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 TGM4P49221 684 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 CAPZA1P52907 286 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 ACTA2P62736 377 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 ACTG2P63267 376 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 ELF3P78545 371 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-226ENST00000473066 ZNF85Q03923 595 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 ZSCAN26Q16670 478 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 SLC25A30Q5SVS4 291 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 ZNF788Q6ZQV5 615 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 POC1AQ8NBT0 407 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 TMEM185AQ8NFB2 350 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 ANGPTL6Q8NI99 470 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 TRMT10AQ8TBZ6 339 aaKnown RBP12.9□□□□□ -0.34
MRPL55-226ENST00000473066 RORBQ92753 470 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 LHX4Q969G2 390 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 UBE2FQ969M7 185 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 Q96MT0 163 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 GAFA1Q96PS6 74 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 DUX5Q96PT3 197 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 TBX15Q96SF7 602 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 MBOAT4Q96T53 435 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 SIRPDQ9H106 197 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 CNTD2Q9H8S5 307 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 RASL12Q9NYN1 266 aa12.9□□□□□ -0.34
MRPL55-226ENST00000473066 A0A1W2PQ09 198 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 SIGLEC5O15389 551 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 NXPH2O95156 264 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 SERPINA3P01011 423 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 HTR1AP08908 422 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 SELLP14151 372 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 MMP9P14780 707 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 CNN3Q15417 329 aaKnown RBP12.89□□□□□ -0.35
MRPL55-226ENST00000473066 CDONQ4KMG0 1287 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 TMEM42Q69YG0 159 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 KCTD20Q7Z5Y7 419 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 FGFRL1Q8N441 504 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 ACBD7Q8N6N7 88 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 KIR3DL3Q8N743 410 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 ZNF555Q8NEP9 628 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 DMRTB1Q96MA1 342 aa12.89□□□□□ -0.35
MRPL55-226ENST00000473066 ZNF48Q96MX3 618 aaPredicted RBP12.89□□□□□ -0.35
MRPL55-226ENST00000473066 DCTN5Q9BTE1 182 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms