RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 A0A0X1KG70 313 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 IZUMO1RA6ND01 250 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 TRDMT1O14717 391 aaKnown RBP2.44□□□□□ -2.02
CLK1-209ENST00000472679 LCA5LO95447 670 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 TTC4O95801 387 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 OR5AC1P0C628 307 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 GABRR2P28476 465 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 OR12D2P58182 307 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 YWHAEP62258 255 aaKnown RBP2.44□□□□□ -2.02
CLK1-209ENST00000472679 RAB11AP62491 216 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 RAB11BQ15907 218 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 LRRC8AQ8IWT6 810 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 CNPY4Q8N129 248 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 BBOF1Q8ND07 529 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 OR4D6Q8NGJ1 314 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 OR4C13Q8NGP0 309 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 YIPF6Q96EC8 236 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 MRPL48Q96GC5 212 aaKnown RBP2.44□□□□□ -2.02
CLK1-209ENST00000472679 STMN4Q9H169 189 aaPredicted RBP2.44□□□□□ -2.02
CLK1-209ENST00000472679 VSIRQ9H7M9 311 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 ZMAT5Q9UDW3 170 aaKnown RBP2.44□□□□□ -2.02
CLK1-209ENST00000472679 ENPP4Q9Y6X5 453 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 DHX57Q6P158 1386 aaKnown RBP2.44□□□□□ -2.02
CLK1-209ENST00000472679 ELP1O95163 1332 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 WDR19Q8NEZ3 1342 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 NLRC5Q86WI3 1866 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 SMC2O95347 1197 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 ARL2P36404 184 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 ERFP50548 548 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 CLDN8P56748 225 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 MTPNP58546 118 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 SLC35A1P78382 337 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 MEF2CQ06413 473 aaPredicted RBP2.43□□□□□ -2.02
CLK1-209ENST00000472679 SLC9A3R2Q15599 337 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 ZFAND6Q6FIF0 208 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 FA2HQ7L5A8 372 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 MRPL21Q7Z2W9 205 aaKnown RBP2.43□□□□□ -2.02
CLK1-209ENST00000472679 SLC7A5P1Q8MH63 180 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 RNF10Q8N5U6 811 aaKnown RBP2.43□□□□□ -2.02
CLK1-209ENST00000472679 CYB561A3Q8NBI2 242 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 OR52K2Q8NGK3 314 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 STX18Q9P2W9 335 aaKnown RBP2.43□□□□□ -2.02
CLK1-209ENST00000472679 SLC22A7Q9Y694 548 aa2.43□□□□□ -2.02
CLK1-209ENST00000472679 FBN1P35555 2871 aaKnown RBP2.42□□□□□ -2.02
CLK1-209ENST00000472679 JCADQ9P266 1359 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 HMMRO75330 724 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 IGHG2P01859 326 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 SLC35G6P0C7Q6 338 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 SEC11BP0C7V7 166 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 PMCHP20382 165 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 ACOT2P49753 483 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 RGS6P49758 472 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 LCN2P80188 198 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 ADIGQ0VDE8 80 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 BIKQ13323 160 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 MAPRE2Q15555 327 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 PIP5KL1Q5T9C9 394 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 MLIPQ5VWP3 458 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 APOBEC3HQ6NTF7 200 aaKnown RBP2.42□□□□□ -2.02
CLK1-209ENST00000472679 ZFP62Q8NB50 900 aaPredicted RBP2.42□□□□□ -2.02
CLK1-209ENST00000472679 PROKR2Q8NFJ6 384 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 FAM57AQ8TBR7 257 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 AGR3Q8TD06 166 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 PIH1D2Q8WWB5 315 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 ITLN2Q8WWU7 325 aaPredicted RBP2.42□□□□□ -2.02
CLK1-209ENST00000472679 BAALCQ8WXS3 180 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 TMEM234Q8WY98 164 aa2.42□□□□□ -2.02
CLK1-209ENST00000472679 RBPMSQ93062 196 aaKnown RBP2.42□□□□□ -2.02
CLK1-209ENST00000472679 ISG20Q96AZ6 181 aaKnown RBP2.42□□□□□ -2.02
CLK1-209ENST00000472679 GOLGA6L4A6NEF3 574 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 J3QT63 122 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 KCNK2O95069 426 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 KLK1P06870 262 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 PAX6P26367 422 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 ATP5G2Q06055 141 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 HIKESHIQ53FT3 197 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 OR10Z1Q8NGY1 313 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 OR8D1Q8WZ84 308 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 PEX13Q92968 403 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 ZNF707Q96C28 371 aaPredicted RBP2.41□□□□□ -2.02
CLK1-209ENST00000472679 CERS2Q96G23 380 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 OR2V2Q96R30 315 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 PKMYT1Q99640 499 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 ZNF649Q9BS31 505 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 PLA2G12AQ9BZM1 189 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 FAM60AQ9NP50 221 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 OR2S2Q9NQN1 319 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 KLF12Q9Y4X4 402 aa2.41□□□□□ -2.02
CLK1-209ENST00000472679 NACADO15069 1562 aa2.4□□□□□ -2.02
CLK1-209ENST00000472679 TRAV8-4A0A0B4J246 113 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 A0A1B0GTQ1 180 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 NCF1BA6NI72 391 aaPredicted RBP2.4□□□□□ -2.03
CLK1-209ENST00000472679 NCF1CA8MVU1 366 aaPredicted RBP2.4□□□□□ -2.03
CLK1-209ENST00000472679 DFFAO00273 331 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 GCGP01275 180 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 P01737 135 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 STAG3L3P0CL85 134 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 GNRHRP30968 328 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms