RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 YY1AP1Q9H869 796 aa11.15□□□□□ -0.62
SMURF1-203ENST00000472627 CD300AQ9UGN4 299 aa11.15□□□□□ -0.62
SMURF1-203ENST00000472627 LSM4Q9Y4Z0 139 aaKnown RBP11.15□□□□□ -0.62
SMURF1-203ENST00000472627 COMMD3-BMI1R4GMX3 469 aa11.15□□□□□ -0.62
SMURF1-203ENST00000472627 TVP23AA6NH52 213 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 CST4P01036 141 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 PGA5P0DJD9 388 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 RHCEP18577 417 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 ANOS1P23352 680 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 CHATP28329 748 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 FMO3P31513 532 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 BRS3P32247 399 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 PYCR1P32322 319 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 IFNGR2P38484 337 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 MYCNOSP40205 109 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 BLVRAP53004 296 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 GNG3P63215 75 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 ABCA11PQ4W5N1 156 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 NKAPLQ5M9Q1 402 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 LCN8Q6JVE9 175 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 ZBTB49Q6ZSB9 765 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 ARPINQ7Z6K5 226 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 OSR2Q8N2R0 312 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 C11orf42Q8N5U0 333 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 OR4M1Q8NGD0 313 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 OR52L1Q8NGH7 329 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 PIGCQ92535 297 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 STMN2Q93045 179 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 ASCL2Q99929 193 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 HILPDAQ9Y5L2 63 aa11.14□□□□□ -0.63
SMURF1-203ENST00000472627 PSMB11A5LHX3 300 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 C17orf98A8MV24 154 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 M0QZK8 103 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 CXCR6O00574 342 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 MTRF1O75570 445 aaKnown RBP11.13□□□□□ -0.63
SMURF1-203ENST00000472627 SERPINA1P01009 418 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 GPM6AP51674 278 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 SMIM11AP58511 58 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 PLBD1Q6P4A8 553 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 FAM81AQ8TBF8 368 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 TLCD1Q96CP7 247 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 PARD6BQ9BYG5 372 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 VIPAS39Q9H9C1 493 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 ZFP57Q9NU63 452 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 NKX1-2Q9UD57 310 aaPredicted RBP11.13□□□□□ -0.63
SMURF1-203ENST00000472627 SACSQ9NZJ4 4579 aa11.13□□□□□ -0.63
SMURF1-203ENST00000472627 TRBV4-1A0A0J9YWV2 114 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 RFPL4AA6NLU0 287 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 FAM90A22PA8MWA6 464 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 RFPL4AL1F8VTS6 287 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 ZNF593O00488 134 aaPredicted RBP11.12□□□□□ -0.63
SMURF1-203ENST00000472627 ZNF728P0DKX0 622 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 DCTDP32321 178 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 CEBPDP49716 269 aaPredicted RBP11.12□□□□□ -0.63
SMURF1-203ENST00000472627 ZNF121P58317 390 aaPredicted RBP11.12□□□□□ -0.63
SMURF1-203ENST00000472627 RPL23AP62750 156 aaKnown RBP11.12□□□□□ -0.63
SMURF1-203ENST00000472627 ZNF273Q14593 569 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 TEX30Q5JUR7 227 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 SLC35F1Q5T1Q4 408 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 RPL13AP3Q6NVV1 102 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 ETV3LQ6ZN32 361 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 FAM162AQ96A26 154 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 RCHY1Q96PM5 261 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 SLC25A33Q9BSK2 321 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 PPP1R3EQ9H7J1 279 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 BRD7Q9NPI1 651 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 DNAJC27Q9NZQ0 273 aa11.12□□□□□ -0.63
SMURF1-203ENST00000472627 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMURF1-203ENST00000472627 V9GYY5 206 aaPredicted RBP11.12□□□□□ -0.63
SMURF1-203ENST00000472627 A0A0G2JND7 137 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 DHRS12A0PJE2 317 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 OR5B21A6NL26 309 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 ZNF732B4DXR9 585 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 SLC22A2O15244 555 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 IGHV1-8P0DP01 117 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 PIPP12273 146 aaPredicted RBP11.11□□□□□ -0.63
SMURF1-203ENST00000472627 PRDX2P32119 198 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 RAB25P57735 213 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 CBX1P83916 185 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 SEC23BQ15437 767 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 KLHL12Q53G59 568 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 C9orf152Q5JTZ5 239 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 C9orf66Q5T8R8 295 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 ACP7Q6ZNF0 438 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.11□□□□□ -0.63
SMURF1-203ENST00000472627 OR51L1Q8NGJ5 315 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 OR52J3Q8NH60 311 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 HPSE2Q8WWQ2 592 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 PRR25Q96S07 402 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 OR51I2Q9H344 312 aa11.11□□□□□ -0.63
SMURF1-203ENST00000472627 OR2F2O95006 317 aa11.1□□□□□ -0.63
SMURF1-203ENST00000472627 TK1P04183 234 aa11.1□□□□□ -0.63
SMURF1-203ENST00000472627 HTR1DP28221 377 aa11.1□□□□□ -0.63
SMURF1-203ENST00000472627 ECI1P42126 302 aa11.1□□□□□ -0.63
SMURF1-203ENST00000472627 ACTA2P62736 377 aa11.1□□□□□ -0.63
SMURF1-203ENST00000472627 ACTG2P63267 376 aa11.1□□□□□ -0.63
SMURF1-203ENST00000472627 ACTC1P68032 377 aa11.1□□□□□ -0.63
SMURF1-203ENST00000472627 ACTA1P68133 377 aa11.1□□□□□ -0.63
SMURF1-203ENST00000472627 HAGHLQ6PII5 290 aaPredicted RBP11.1□□□□□ -0.63
SMURF1-203ENST00000472627 C8orf86Q6ZUL3 223 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms