RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 EIF2B1Q14232 305 aaKnown RBP7.48□□□□□ -1.21
VCL-204ENST00000472585 ZNF273Q14593 569 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 TAF13Q15543 124 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 TIGD6Q17RP2 521 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 GFOD2Q3B7J2 385 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 ZNF770Q6IQ21 691 aaPredicted RBP7.48□□□□□ -1.21
VCL-204ENST00000472585 C10orf99Q6UWK7 81 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 KRT74Q7RTS7 529 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 ARPINQ7Z6K5 226 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 TMEM185AQ8NFB2 350 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 OR4M1Q8NGD0 313 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 OR9Q2Q8NGE9 314 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 OR5D13Q8NGL4 314 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 GNPDA2Q8TDQ7 276 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 PIGCQ92535 297 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 SDSLQ96GA7 329 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 PYURFQ96I23 114 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 ZNF488Q96MN9 340 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 MICU1Q9BPX6 476 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 PRSS22Q9GZN4 317 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 MED20Q9H944 212 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 PALMDQ9NP74 551 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 INPP5EQ9NRR6 644 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 IL20Q9NYY1 176 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 ZMAT5Q9UDW3 170 aaKnown RBP7.48□□□□□ -1.21
VCL-204ENST00000472585 CD300AQ9UGN4 299 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 TCF19Q9Y242 345 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 TRBV23-1A0A0A0MS06 115 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 LCE6AA0A183 80 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 MTRF1O75570 445 aaKnown RBP7.47□□□□□ -1.21
VCL-204ENST00000472585 SASH3O75995 380 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 ZFPL1O95159 310 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 ALDOBP05062 364 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 RRM2P31350 389 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 FMO3P31513 532 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 GPM6AP51674 278 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 PSME3P61289 254 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 IL5RAQ01344 420 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 PPP1R8Q12972 351 aaKnown RBP7.47□□□□□ -1.21
VCL-204ENST00000472585 CNN3Q15417 329 aaKnown RBP7.47□□□□□ -1.21
VCL-204ENST00000472585 UNQ9370/PRO34162Q6UXP9 181 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 HACD2Q6Y1H2 254 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 ZNF782Q6ZMW2 699 aaPredicted RBP7.47□□□□□ -1.21
VCL-204ENST00000472585 MEPCEQ7L2J0 689 aaKnown RBP7.47□□□□□ -1.21
VCL-204ENST00000472585 CSNK2A3Q8NEV1 391 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 OR4C15Q8NGM1 316 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 OR5K1Q8NHB7 308 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 AQP3Q92482 292 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 RTL8AQ9BWD3 113 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 MUC13Q9H3R2 512 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 GORASP2Q9H8Y8 452 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 GAR1Q9NY12 217 aaKnown RBP7.47□□□□□ -1.21
VCL-204ENST00000472585 TAS2R1Q9NYW7 299 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 MPC1Q9Y5U8 109 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 CDH10Q9Y6N8 788 aa7.47□□□□□ -1.21
VCL-204ENST00000472585 DYNC2H1Q8NCM8 4307 aaKnown RBP7.46□□□□□ -1.21
VCL-204ENST00000472585 TCRBV4S1A1TA0A5B7 111 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 FAM183AA6NL82 134 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 RFPL4AA6NLU0 287 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 TMEM210A6NLX4 147 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 ODF3BA8MYP8 253 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 RFPL4AL1F8VTS6 287 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 SLC22A2O15244 555 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 CHRM2P08172 466 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 GNALP38405 381 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 VDAC2P45880 294 aaPredicted RBP7.46□□□□□ -1.22
VCL-204ENST00000472585 HMGA2P52926 109 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 SLC25A1P53007 311 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 RPL31P62899 125 aaKnown RBP7.46□□□□□ -1.22
VCL-204ENST00000472585 GRB2P62993 217 aaKnown RBP7.46□□□□□ -1.22
VCL-204ENST00000472585 KRT72Q14CN4 511 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 SSX2Q16385 188 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 CEP78Q5JTW2 689 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 ACP7Q6ZNF0 438 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 CCDC121Q6ZUS5 278 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 KCTD8Q6ZWB6 473 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 TIGD4Q8IY51 512 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 Q8NFD4 153 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 OR5AU1Q8NGC0 362 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 OR52H1Q8NGJ2 320 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 OR6K6Q8NGW6 343 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 OR2T27Q8NH04 317 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 TSSK6Q9BXA6 273 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 OR10A2Q9H208 303 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 HEXA-AS1Q9H8Q6 139 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 EFCAB1Q9HAE3 211 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 KRCC1Q9NPI7 259 aaPredicted RBP7.46□□□□□ -1.22
VCL-204ENST00000472585 SAMD4AQ9UPU9 718 aaKnown RBP7.46□□□□□ -1.22
VCL-204ENST00000472585 KLHDC2Q9Y2U9 406 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 LYVE1Q9Y5Y7 322 aa7.46□□□□□ -1.22
VCL-204ENST00000472585 ANXA2P2A6NMY6 339 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 C17orf98A8MV24 154 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 ZNF732B4DXR9 585 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 F2RL2O00254 374 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 SYNGR1O43759 233 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 GLCEO94923 617 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 LYL1P12980 280 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 HSD11B1P28845 292 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 PRDX2P32119 198 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 SLC15A1P46059 708 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms