RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 AADACL3Q5VUY0 350 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 GSG1LQ6UXU4 331 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 INTS12Q96CB8 462 aaKnown RBP13.07□□□□□ -0.32
UBXN11-213ENST00000472155 URM1Q9BTM9 101 aaKnown RBP13.07□□□□□ -0.32
UBXN11-213ENST00000472155 SLC7A10Q9NS82 523 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 COQ3Q9NZJ6 369 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 C13orf42A0A1B0GVH6 325 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 FAM221AA4D161 298 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 C3orf80F5H4A9 247 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 RP2O75695 350 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 NMBP08949 121 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 EDN3P14138 238 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 NAT1P18440 290 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 MPGP29372 298 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 LHX2P50458 406 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 TGIF1Q15583 401 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 OR1C1Q15619 314 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 AANATQ16613 207 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 DCAF10Q5QP82 559 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 TUSC5Q8IXB3 177 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 ZDHHC22Q8N966 263 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 FNDC9Q8TBE3 224 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 CPT1CQ8TCG5 803 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 PP6455Q8WZ26 134 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 OCSTAMPQ9BR26 566 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 FAAP24Q9BTP7 215 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 DDA1Q9BW61 102 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 CALHM2Q9HA72 323 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 ZNF701Q9NV72 531 aaPredicted RBP13.07□□□□□ -0.32
UBXN11-213ENST00000472155 PRR14LQ5THK1 2151 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 DHRS7CA6NNS2 312 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 CYTIPO60759 359 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 RRASP10301 218 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 SUPT4H1P63272 117 aaKnown RBP13.06□□□□□ -0.32
UBXN11-213ENST00000472155 CLVS2Q5SYC1 327 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 CSNK2A3Q8NEV1 391 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 CCDC120Q96HB5 630 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 ZNF75AQ96N20 296 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 NUDT16L1Q9BRJ7 211 aaKnown RBP13.06□□□□□ -0.32
UBXN11-213ENST00000472155 RTBDNQ9BSG5 229 aaPredicted RBP13.06□□□□□ -0.32
UBXN11-213ENST00000472155 MT-CO3P00414 261 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 CD8AP01732 235 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 PIGYQ3MUY2 71 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 PABPC1L2AQ5JQF8 200 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 ABHD17BQ5VST6 288 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 DRAM2Q6UX65 266 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 Q6ZSR3 168 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 GPR132Q9UNW8 380 aa13.06□□□□□ -0.32
UBXN11-213ENST00000472155 RNF222A6NCQ9 220 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 DNPH1O43598 174 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 SCGNO76038 276 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 PDGFAP04085 211 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 CCNOP22674 350 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 SERPINF1P36955 418 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 CLDN18P56856 261 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 RAB14P61106 215 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 C5orf24Q7Z6I8 188 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 OR52H1Q8NGJ2 320 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 OR5H2Q8NGV7 314 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 ADAMTS17Q8TE56 1095 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 REG4Q9BYZ8 158 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 TTTY12Q9BZ98 90 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 LIME1Q9H400 295 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 NARFLQ9H6Q4 476 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 EHFQ9NZC4 300 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 FIGNL2A6NMB9 653 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 MTRF1O75570 445 aaKnown RBP13.05□□□□□ -0.32
UBXN11-213ENST00000472155 HLA-HP01893 362 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 MMP7P09237 267 aaPredicted RBP13.05□□□□□ -0.32
UBXN11-213ENST00000472155 RPA2P15927 270 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 OPRM1P35372 400 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 ALDH3B1P43353 468 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 FAM3AP98173 230 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 ANKRD55Q3KP44 614 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 HES3Q5TGS1 186 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 Q96M66 194 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 S100A13Q99584 98 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 ZPBPQ9BS86 351 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 ZNF629Q9UEG4 869 aaPredicted RBP13.05□□□□□ -0.32
UBXN11-213ENST00000472155 NOSIPQ9Y314 301 aaKnown RBP13.05□□□□□ -0.32
UBXN11-213ENST00000472155 LIPGQ9Y5X9 500 aa13.05□□□□□ -0.32
UBXN11-213ENST00000472155 LGALS8O00214 317 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 TNFSF15O95150 251 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 SFTPBP07988 381 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 UBBP0CG47 229 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 ARF1P84077 181 aaKnown RBP13.04□□□□□ -0.32
UBXN11-213ENST00000472155 VAX1Q5SQQ9 334 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 C11orf87Q6NUJ2 197 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 CLEC18BQ6UXF7 455 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 TMEM251Q8N6I4 163 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 PHB2Q99623 299 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 PRRG4Q9BZD6 226 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 BOKQ9UMX3 212 aaPredicted RBP13.04□□□□□ -0.32
UBXN11-213ENST00000472155 TIMM10BQ9Y5J6 103 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 GMFBP60983 142 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 RIPPLY1Q0D2K3 151 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 SCRN3Q0VDG4 424 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 SRSF6Q13247 344 aaKnown RBP13.04□□□□□ -0.32
UBXN11-213ENST00000472155 PNLIPRP3Q17RR3 467 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 KRTAP27-1Q3LI81 207 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms