RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 PTGES3Q15185 160 aaKnown RBP18.49■□□□□ 0.55
C9orf3-213ENST00000471978 ZNF829Q3KNS6 432 aaPredicted RBP18.49■□□□□ 0.55
C9orf3-213ENST00000471978 GDPGP1Q6ZNW5 385 aa18.49■□□□□ 0.55
C9orf3-213ENST00000471978 C1orf122Q6ZSJ8 110 aa18.49■□□□□ 0.55
C9orf3-213ENST00000471978 MOB3CQ70IA8 216 aa18.49■□□□□ 0.55
C9orf3-213ENST00000471978 OR5A2Q8NGI9 324 aa18.49■□□□□ 0.55
C9orf3-213ENST00000471978 ZNF671Q8TAW3 534 aa18.49■□□□□ 0.55
C9orf3-213ENST00000471978 LRTOMTQ8WZ04 291 aa18.49■□□□□ 0.55
C9orf3-213ENST00000471978 IKZF2Q9UKS7 526 aa18.49■□□□□ 0.55
C9orf3-213ENST00000471978 PIGLQ9Y2B2 252 aa18.49■□□□□ 0.55
C9orf3-213ENST00000471978 RNF114Q9Y508 228 aa18.49■□□□□ 0.55
C9orf3-213ENST00000471978 IGKV1D-17A0A075B6S4 117 aa18.48■□□□□ 0.55
C9orf3-213ENST00000471978 OR5B21A6NL26 309 aa18.48■□□□□ 0.55
C9orf3-213ENST00000471978 PRKYO43930 277 aa18.48■□□□□ 0.55
C9orf3-213ENST00000471978 RIDAP52758 137 aaKnown RBP18.48■□□□□ 0.55
C9orf3-213ENST00000471978 TAF9Q16594 264 aa18.48■□□□□ 0.55
C9orf3-213ENST00000471978 PLCXD3Q63HM9 321 aa18.48■□□□□ 0.55
C9orf3-213ENST00000471978 LINC01006Q8NI28 216 aa18.48■□□□□ 0.55
C9orf3-213ENST00000471978 BCAS4Q8TDM0 211 aa18.48■□□□□ 0.55
C9orf3-213ENST00000471978 AQP3Q92482 292 aa18.48■□□□□ 0.55
C9orf3-213ENST00000471978 TNFRSF14Q92956 283 aa18.48■□□□□ 0.55
C9orf3-213ENST00000471978 UTP4Q969X6 686 aaKnown RBP18.48■□□□□ 0.55
C9orf3-213ENST00000471978 PPP1R14AQ96A00 147 aa18.48■□□□□ 0.55
C9orf3-213ENST00000471978 CNN2Q99439 309 aaKnown RBP18.48■□□□□ 0.55
C9orf3-213ENST00000471978 CITED1Q99966 193 aa18.48■□□□□ 0.55
C9orf3-213ENST00000471978 ZNRD1Q9P1U0 126 aa18.48■□□□□ 0.55
C9orf3-213ENST00000471978 BTBD17A6NE02 478 aa18.47■□□□□ 0.55
C9orf3-213ENST00000471978 M0R1W7 72 aa18.47■□□□□ 0.55
C9orf3-213ENST00000471978 IGLV3-1P01715 115 aa18.47■□□□□ 0.55
C9orf3-213ENST00000471978 PSG2P11465 335 aa18.47■□□□□ 0.55
C9orf3-213ENST00000471978 FAHP16930 419 aa18.47■□□□□ 0.55
C9orf3-213ENST00000471978 ESRRGP62508 458 aa18.47■□□□□ 0.55
C9orf3-213ENST00000471978 MFGE8Q08431 387 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-213ENST00000471978 ZBTB37Q5TC79 503 aa18.47■□□□□ 0.55
C9orf3-213ENST00000471978 HAGHLQ6PII5 290 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-213ENST00000471978 MEPCEQ7L2J0 689 aaKnown RBP18.47■□□□□ 0.55
C9orf3-213ENST00000471978 BCDIN3DQ7Z5W3 292 aaKnown RBP18.47■□□□□ 0.55
C9orf3-213ENST00000471978 ZNRF1Q8ND25 227 aa18.47■□□□□ 0.55
C9orf3-213ENST00000471978 OR5K1Q8NHB7 308 aa18.47■□□□□ 0.55
C9orf3-213ENST00000471978 DUS3LQ96G46 650 aaKnown RBP18.47■□□□□ 0.55
C9orf3-213ENST00000471978 PRRG3Q9BZD7 231 aa18.47■□□□□ 0.55
C9orf3-213ENST00000471978 METTL8Q9H825 291 aaKnown RBP18.47■□□□□ 0.55
C9orf3-213ENST00000471978 ELL3Q9HB65 397 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-213ENST00000471978 NUFIP1Q9UHK0 495 aaKnown RBP18.47■□□□□ 0.55
C9orf3-213ENST00000471978 ENPP5Q9UJA9 477 aa18.47■□□□□ 0.55
C9orf3-213ENST00000471978 ZNF222Q9UK12 451 aa18.47■□□□□ 0.55
C9orf3-213ENST00000471978 MEIOCA2RUB1 952 aa18.46■□□□□ 0.55
C9orf3-213ENST00000471978 PAHP00439 452 aa18.46■□□□□ 0.55
C9orf3-213ENST00000471978 UBE2E1P51965 193 aa18.46■□□□□ 0.55
C9orf3-213ENST00000471978 KRTAP10-3P60369 221 aa18.46■□□□□ 0.55
C9orf3-213ENST00000471978 BLMHQ13867 455 aa18.46■□□□□ 0.55
C9orf3-213ENST00000471978 NCR3LG1Q68D85 454 aa18.46■□□□□ 0.55
C9orf3-213ENST00000471978 PNKDQ8N490 385 aa18.46■□□□□ 0.55
C9orf3-213ENST00000471978 TMEM185AQ8NFB2 350 aa18.46■□□□□ 0.55
C9orf3-213ENST00000471978 RASL12Q9NYN1 266 aa18.46■□□□□ 0.55
C9orf3-213ENST00000471978 H2AFY2Q9P0M6 372 aaPredicted RBP18.46■□□□□ 0.55
C9orf3-213ENST00000471978 VPREB3Q9UKI3 123 aa18.46■□□□□ 0.55
C9orf3-213ENST00000471978 GTF2A1LQ9UNN4 478 aa18.46■□□□□ 0.55
C9orf3-213ENST00000471978 MAB21L2Q9Y586 359 aa18.46■□□□□ 0.55
C9orf3-213ENST00000471978 M0R129 80 aa18.45■□□□□ 0.54
C9orf3-213ENST00000471978 MTRF1O75570 445 aaKnown RBP18.45■□□□□ 0.54
C9orf3-213ENST00000471978 DHRS3O75911 302 aa18.45■□□□□ 0.54
C9orf3-213ENST00000471978 NRASP01111 189 aa18.45■□□□□ 0.54
C9orf3-213ENST00000471978 SAA4P35542 130 aa18.45■□□□□ 0.54
C9orf3-213ENST00000471978 CXCR4P61073 352 aa18.45■□□□□ 0.54
C9orf3-213ENST00000471978 ZNF322Q6U7Q0 402 aaPredicted RBP18.45■□□□□ 0.54
C9orf3-213ENST00000471978 ZSCAN4Q8NAM6 433 aaPredicted RBP18.45■□□□□ 0.54
C9orf3-213ENST00000471978 APOL4Q9BPW4 351 aa18.45■□□□□ 0.54
C9orf3-213ENST00000471978 KRT84Q9NSB2 600 aa18.45■□□□□ 0.54
C9orf3-213ENST00000471978 TRBV23-1A0A0A0MS06 115 aa18.44■□□□□ 0.54
C9orf3-213ENST00000471978 SLC22A31A6NKX4 558 aa18.44■□□□□ 0.54
C9orf3-213ENST00000471978 LOC110117498-PIK3R3F6TDL0 507 aa18.44■□□□□ 0.54
C9orf3-213ENST00000471978 MITFO75030 526 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-213ENST00000471978 TTRP02766 147 aa18.44■□□□□ 0.54
C9orf3-213ENST00000471978 CAPZA1P52907 286 aa18.44■□□□□ 0.54
C9orf3-213ENST00000471978 ZNF684Q5T5D7 378 aa18.44■□□□□ 0.54
C9orf3-213ENST00000471978 DHRS7BQ6IAN0 325 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-213ENST00000471978 Q6ZSV7 163 aa18.44■□□□□ 0.54
C9orf3-213ENST00000471978 SLC35F2Q8IXU6 374 aa18.44■□□□□ 0.54
C9orf3-213ENST00000471978 FAM185AQ8N0U4 392 aa18.44■□□□□ 0.54
C9orf3-213ENST00000471978 TCEANCQ8N8B7 351 aa18.44■□□□□ 0.54
C9orf3-213ENST00000471978 SDSLQ96GA7 329 aa18.44■□□□□ 0.54
C9orf3-213ENST00000471978 CADM1Q9BY67 442 aaKnown RBP18.44■□□□□ 0.54
C9orf3-213ENST00000471978 H0YAE9 185 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 M0QZ24 198 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 DYNC1I1O14576 645 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 TIMM23O14925 209 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 MAGEB4O15481 346 aaPredicted RBP18.43■□□□□ 0.54
C9orf3-213ENST00000471978 SRSF10O75494 262 aaKnown RBP18.43■□□□□ 0.54
C9orf3-213ENST00000471978 CLPXO76031 633 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 EPHA2P29317 976 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 PROK1P58294 105 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 ACTR3P61158 418 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 DEFA6Q01524 100 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 ACSM1Q08AH1 577 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 BCL2L15Q5TBC7 163 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 AADACL4Q5VUY2 407 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 SLX4IPQ5VYV7 408 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 NXNL2Q5VZ03 156 aa18.43■□□□□ 0.54
C9orf3-213ENST00000471978 ACP7Q6ZNF0 438 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms