RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 RNF10Q8N5U6 811 aaKnown RBP1.02□□□□□ -2.25
RBM39-228ENST00000471635 WDR31Q8NA23 367 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 ZFP62Q8NB50 900 aaPredicted RBP1.02□□□□□ -2.25
RBM39-228ENST00000471635 LY6G5BQ8NDX9 201 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 OR4D6Q8NGJ1 314 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 ZNF420Q8TAQ5 688 aaPredicted RBP1.02□□□□□ -2.25
RBM39-228ENST00000471635 CA5BP1Q8WTZ4 195 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 APH1AQ96BI3 265 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 SNF8Q96H20 258 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 C9orf72Q96LT7 481 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 TMEM175Q9BSA9 504 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 NAA50Q9GZZ1 169 aaKnown RBP1.02□□□□□ -2.25
RBM39-228ENST00000471635 DEFB129Q9H1M3 183 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 DSN1Q9H410 356 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 DUSP21Q9H596 190 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 EXO5Q9H790 373 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 FAM60AQ9NP50 221 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 ASF1BQ9NVP2 202 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 NLE1Q9NVX2 485 aaPredicted RBP1.02□□□□□ -2.25
RBM39-228ENST00000471635 AHSPQ9NZD4 102 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 STX18Q9P2W9 335 aaKnown RBP1.02□□□□□ -2.25
RBM39-228ENST00000471635 VAX2Q9UIW0 290 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 CES1P1Q9UKY3 287 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 MCTS1Q9ULC4 181 aaKnown RBP1.02□□□□□ -2.25
RBM39-228ENST00000471635 PPIL1Q9Y3C6 166 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 OR51B2Q9Y5P1 312 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 SLC22A7Q9Y694 548 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
RBM39-228ENST00000471635 ELP1O95163 1332 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 IGLV10-54A0A075B6I4 117 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 IGKV1OR2-108A0A075B7D4 117 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 TRAV25A0A0B4J276 109 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 SERTM2A0A1B0GWG4 89 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 LRRIQ4A6NIV6 560 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 CTAG2O75638 210 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 KCNK2O95069 426 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 CPSF4O95639 269 aaKnown RBP1.01□□□□□ -2.25
RBM39-228ENST00000471635 CLDN18P56856 261 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 ATP6V0D1P61421 351 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 GRB2P62993 217 aaKnown RBP1.01□□□□□ -2.25
RBM39-228ENST00000471635 RPL18AQ02543 176 aaKnown RBP1.01□□□□□ -2.25
RBM39-228ENST00000471635 ATP5G2Q06055 141 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 FMODQ06828 376 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 TSC22D1Q15714 1073 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 KRTAP25-1Q3LHN0 102 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 PDZD11Q5EBL8 140 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 LDLRAD2Q5SZI1 272 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 LIN9Q5TKA1 542 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 ZNF660Q6AZW8 331 aaPredicted RBP1.01□□□□□ -2.25
RBM39-228ENST00000471635 NDUFAF7Q7L592 441 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 LRRC8AQ8IWT6 810 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 OR1S1Q8NH92 325 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 MUC7Q8TAX7 377 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 ITLN2Q8WWU7 325 aaPredicted RBP1.01□□□□□ -2.25
RBM39-228ENST00000471635 YIPF6Q96EC8 236 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 MRPL48Q96GC5 212 aaKnown RBP1.01□□□□□ -2.25
RBM39-228ENST00000471635 CSPG4P5Q96PW8 444 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 DERL3Q96Q80 235 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 TBL1XR1Q9BZK7 514 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 ARV1Q9H2C2 271 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 PRSS16Q9NQE7 514 aa1.01□□□□□ -2.25
RBM39-228ENST00000471635 VWDEQ8N2E2 1590 aa1□□□□□ -2.25
RBM39-228ENST00000471635 BAZ1BQ9UIG0 1483 aaKnown RBP1□□□□□ -2.25
RBM39-228ENST00000471635 DOCK10Q96BY6 2186 aa1□□□□□ -2.25
RBM39-228ENST00000471635 JCADQ9P266 1359 aa1□□□□□ -2.25
RBM39-228ENST00000471635 PHLPP2Q6ZVD8 1323 aa1□□□□□ -2.25
RBM39-228ENST00000471635 A0A0G2JMP0 313 aa1□□□□□ -2.25
RBM39-228ENST00000471635 A0A0X1KG70 313 aa1□□□□□ -2.25
RBM39-228ENST00000471635 SLC22A20A6NK97 555 aa1□□□□□ -2.25
RBM39-228ENST00000471635 TRIM64CA6NLI5 447 aa1□□□□□ -2.25
RBM39-228ENST00000471635 ZNF99A8MXY4 864 aaPredicted RBP1□□□□□ -2.25
RBM39-228ENST00000471635 WRBO00258 174 aa1□□□□□ -2.25
RBM39-228ENST00000471635 MYL12BO14950 172 aa1□□□□□ -2.25
RBM39-228ENST00000471635 UPK1BO75841 260 aa1□□□□□ -2.25
RBM39-228ENST00000471635 SEC11BP0C7V7 166 aa1□□□□□ -2.25
RBM39-228ENST00000471635 GFAPP14136 432 aa1□□□□□ -2.25
RBM39-228ENST00000471635 CD82P27701 267 aa1□□□□□ -2.25
RBM39-228ENST00000471635 RGS6P49758 472 aa1□□□□□ -2.25
RBM39-228ENST00000471635 ERFP50548 548 aa1□□□□□ -2.25
RBM39-228ENST00000471635 KLF3P57682 345 aaPredicted RBP1□□□□□ -2.25
RBM39-228ENST00000471635 TAS2R39P59534 338 aa1□□□□□ -2.25
RBM39-228ENST00000471635 IL18Q14116 193 aa1□□□□□ -2.25
RBM39-228ENST00000471635 ZNF141Q15928 474 aa1□□□□□ -2.25
RBM39-228ENST00000471635 LINC00303Q3SY05 128 aa1□□□□□ -2.25
RBM39-228ENST00000471635 KATNAL2Q8IYT4 538 aa1□□□□□ -2.25
RBM39-228ENST00000471635 MICU2Q8IYU8 434 aa1□□□□□ -2.25
RBM39-228ENST00000471635 OR8K3Q8NH51 312 aa1□□□□□ -2.25
RBM39-228ENST00000471635 FAM57AQ8TBR7 257 aa1□□□□□ -2.25
RBM39-228ENST00000471635 ACTL9Q8TC94 416 aa1□□□□□ -2.25
RBM39-228ENST00000471635 RBPMSQ93062 196 aaKnown RBP1□□□□□ -2.25
RBM39-228ENST00000471635 IGF2BP2-AS1Q96M15 143 aa1□□□□□ -2.25
RBM39-228ENST00000471635 PEBP4Q96S96 227 aa1□□□□□ -2.25
RBM39-228ENST00000471635 GABRG3Q99928 467 aa1□□□□□ -2.25
RBM39-228ENST00000471635 STMN4Q9H169 189 aaPredicted RBP1□□□□□ -2.25
RBM39-228ENST00000471635 OR51B5Q9H339 312 aa1□□□□□ -2.25
RBM39-228ENST00000471635 OR2S2Q9NQN1 319 aa1□□□□□ -2.25
RBM39-228ENST00000471635 PXMP2Q9NR77 195 aa1□□□□□ -2.25
RBM39-228ENST00000471635 INIPQ9NRY2 104 aa1□□□□□ -2.25
RBM39-228ENST00000471635 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
RBM39-228ENST00000471635 TRAV8-6A0A0B4J262 113 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms