RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ENPP5Q9UJA9 477 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 HHLA2Q9UM44 414 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 SSR3Q9UNL2 185 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 SLC22A13Q9Y226 551 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 PKD1L1Q8TDX9 2849 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 TRRAPQ9Y4A5 3859 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 TRBV5-5A0A0J9YX44 114 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 A0A1B0GVI7 797 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 LOC107986453A0A1B0GWG9 222 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 TRDV1A0A1B0GX56 115 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 PLSCR5A0PG75 271 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 ISPDA4D126 451 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 DPPA5A6NC42 116 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 DNAJC9-AS1A6NH13 148 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 A8MXK9 166 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 AIREO43918 545 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 MTRF1O75570 445 aaKnown RBP7.62□□□□□ -1.19
SF3A1-206ENST00000471037 GATBO75879 557 aaKnown RBP7.62□□□□□ -1.19
SF3A1-206ENST00000471037 GABARAPO95166 117 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 IGHV2-70P01814 119 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 CCL1P22362 96 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 TUBG1P23258 451 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 GADD45AP24522 165 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 ZFP36P26651 326 aaKnown RBP7.62□□□□□ -1.19
SF3A1-206ENST00000471037 MAPK3P27361 379 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-206ENST00000471037 MPV17P39210 176 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 TMBIM6P55061 237 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 LCN2P80188 198 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 MALLQ13021 153 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 SNAI3Q3KNW1 292 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 PDLIM3Q53GG5 364 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-206ENST00000471037 ZMAT1Q5H9K5 638 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 Q6ZSR3 168 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 NAA40Q86UY6 237 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 COMMD2Q86X83 199 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 CLVS1Q8IUQ0 354 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-206ENST00000471037 ABHD4Q8TB40 342 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 SLC25A40Q8TBP6 338 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 KLF14Q8TD94 323 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-206ENST00000471037 RAB2BQ8WUD1 216 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 RGP1Q92546 391 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-206ENST00000471037 TMEM203Q969S6 136 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 PPP1R14AQ96A00 147 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 SPSB4Q96A44 273 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 C1orf147Q96MC9 270 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-206ENST00000471037 EGLN1Q9GZT9 426 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 FAM192AQ9GZU8 254 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 RBM38Q9H0Z9 239 aaKnown RBP7.62□□□□□ -1.19
SF3A1-206ENST00000471037 TUBG2Q9NRH3 451 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 ZNF319Q9P2F9 582 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 PURGQ9UJV8 347 aaKnown RBP7.62□□□□□ -1.19
SF3A1-206ENST00000471037 NUP50Q9UKX7 468 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 ZDHHC8Q9ULC8 765 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 GSTK1Q9Y2Q3 226 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 N6AMT1Q9Y5N5 214 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 NPTNQ9Y639 398 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 CEPT1Q9Y6K0 416 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 TANC2Q9HCD6 1990 aa7.62□□□□□ -1.19
SF3A1-206ENST00000471037 WNK2Q9Y3S1 2297 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 A0A1B0GTI1 187 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 A6NHS1 94 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 DHRS7CA6NNS2 312 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 ZNF879B4DU55 563 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 CLDN34H7C241 214 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 ZNF701M0R085 212 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-206ENST00000471037 P2RY10O00398 339 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 GABRPO00591 440 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 SYT7O43581 403 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 SPRY3O43610 288 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 SC5DO75845 299 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 DHRS3O75911 302 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 CD2P06729 351 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 RNASE1P07998 156 aaKnown RBP7.61□□□□□ -1.19
SF3A1-206ENST00000471037 OCM2P0CE71 109 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 FGF9P31371 208 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-206ENST00000471037 PPP1CBP62140 327 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 RPS11P62280 158 aaKnown RBP eCLIP7.61□□□□□ -1.19
SF3A1-206ENST00000471037 IL13RA1P78552 427 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 FABP5Q01469 135 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 ZNF154Q13106 437 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 ODF4Q2M2E3 257 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 Q499Y3 187 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 TMEM155Q4W5P6 130 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 ACSM3Q53FZ2 586 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 KLF17Q5JT82 389 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-206ENST00000471037 GLYATL3Q5SZD4 288 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 SPATA46Q5T0L3 261 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 TREML4Q6UXN2 200 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 SLC16A12Q6ZSM3 486 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 RFPL4BQ6ZWI9 263 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 MRPL21Q7Z2W9 205 aaKnown RBP7.61□□□□□ -1.19
SF3A1-206ENST00000471037 SPICQ8N5J4 248 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 PLPP7Q8NBV4 271 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 OR51E1Q8TCB6 317 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 TSEN15Q8WW01 171 aaKnown RBP7.61□□□□□ -1.19
SF3A1-206ENST00000471037 SGK3Q96BR1 496 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 ISOC1Q96CN7 298 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 C10orf35Q96D05 121 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 REEP6Q96HR9 211 aa7.61□□□□□ -1.19
SF3A1-206ENST00000471037 CHCHD6Q9BRQ6 235 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms