RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 C1orf185Q5T7R7 199 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 PIP5KL1Q5T9C9 394 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 RPL7L1Q6DKI1 246 aaKnown RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 FBXO42Q6P3S6 717 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 LEG1Q6P5S2 330 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 KCNIP4Q6PIL6 250 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 KCTD9Q7L273 389 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 C17orf64Q86WR6 236 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 TMPRSS12Q86WS5 348 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 SGPP2Q8IWX5 399 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 SLC35F2Q8IXU6 374 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF679Q8IYX0 411 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 TCTEX1D1Q8N7M0 179 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 BMPERQ8N8U9 685 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 POC1AQ8NBT0 407 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF248Q8NDW4 579 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 OR4D5Q8NGN0 318 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 RNASE8Q8TDE3 154 aaKnown RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 GPR119Q8TDV5 335 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 WFIKKN2Q8TEU8 576 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ZCCHC14Q8WYQ9 949 aaKnown RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 EMG1Q92979 244 aaKnown RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 NEIL2Q969S2 332 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 MRPL24Q96A35 216 aaKnown RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 FAM3DQ96BQ1 224 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 FGGYQ96C11 551 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 PCED1BQ96HM7 432 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 GMPPAQ96IJ6 420 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 SNX22Q96L94 193 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 CIB3Q96Q77 187 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 HIST1H2AAQ96QV6 131 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 RNF2Q99496 336 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 CMKLR1Q99788 373 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 PRRX2Q99811 253 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 AGMATQ9BSE5 352 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 FAAP24Q9BTP7 215 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 VAMP8Q9BV40 100 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 HCAR1Q9BXC0 346 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 CHST6Q9GZX3 395 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 CDIP1Q9H305 208 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF430Q9H8G1 570 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 Q9N2K0 584 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 MKKSQ9NPJ1 570 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 PRSS16Q9NQE7 514 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 CBLN4Q9NTU7 201 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 SIDT1Q9NXL6 827 aaKnown RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 MRPL27Q9P0M9 148 aaKnown RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 FBXO4Q9UKT5 387 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 RAB22AQ9UL26 194 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ST3GAL6Q9Y274 331 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 WIPI2Q9Y4P8 454 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 COX11Q9Y6N1 276 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 GREB1Q4ZG55 1949 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 IGLV3-16A0A075B6K0 115 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 TRAV9-1A0A075B6T8 112 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 A0A1B0GU03 582 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 PEX12O00623 359 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 AGPAT2O15120 278 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 RAMP3O60896 148 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 DEDDO75618 318 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 ACTL6BO94805 426 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CSTAP01040 98 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 LCATP04180 440 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 REG1AP05451 166 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 SRP19P09132 144 aaKnown RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 MMP7P09237 267 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CXCL1P09341 107 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 IFI6P09912 130 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 STAG3L3P0CL85 134 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 PGA4P0DJD7 388 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 PGA5P0DJD9 388 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 LAMP2P13473 410 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CD99P14209 185 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 MMP9P14780 707 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CSRP1P21291 193 aaKnown RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 FPR2P25090 351 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 NTSP30990 170 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 TLX1P31314 330 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 FCGR2CP31995 323 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CEACAM3P40198 252 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 AKR1C3P42330 323 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CAPZBP47756 277 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 TMEM33P57088 247 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 RHOGP84095 191 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 NHLH1Q02575 133 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF117Q03924 483 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 MFGE8Q08431 387 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 SCGB2A2Q13296 93 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 TNFAIP1Q13829 316 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 CRMP1Q14194 572 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 PRSS8Q16651 343 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 COX19Q49B96 90 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 DUSP28Q4G0W2 176 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 OCIAD2Q56VL3 154 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 TCEAL5Q5H9L2 206 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 PRR27Q6MZM9 219 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 FAAP20Q6NZ36 180 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 FBXO46Q6PJ61 603 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-207ENST00000468925 KIRREL2Q6UWL6 708 aa4.29□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF836Q6ZNA1 936 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms