RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 FGF20Q9NP95 211 aaPredicted RBP2.56□□□□□ -2
XRN1-207ENST00000468894 DIABLOQ9NR28 239 aa2.56□□□□□ -2
XRN1-207ENST00000468894 INIPQ9NRY2 104 aa2.56□□□□□ -2
XRN1-207ENST00000468894 LYARQ9NX58 379 aaKnown RBP2.56□□□□□ -2
XRN1-207ENST00000468894 NUP50Q9UKX7 468 aa2.56□□□□□ -2
XRN1-207ENST00000468894 RAB23Q9ULC3 237 aa2.56□□□□□ -2
XRN1-207ENST00000468894 FLVCR2Q9UPI3 526 aa2.56□□□□□ -2
XRN1-207ENST00000468894 GINS2Q9Y248 185 aa2.56□□□□□ -2
XRN1-207ENST00000468894 KCNE3Q9Y6H6 103 aa2.56□□□□□ -2
XRN1-207ENST00000468894 SCN1AP35498 2009 aa2.56□□□□□ -2
XRN1-207ENST00000468894 ANKRD12Q6UB98 2062 aa2.56□□□□□ -2
XRN1-207ENST00000468894 SHANK1Q9Y566 2161 aa2.56□□□□□ -2
XRN1-207ENST00000468894 IGLV1-36A0A0B4J1U3 117 aa2.55□□□□□ -2
XRN1-207ENST00000468894 E5RI56 91 aa2.55□□□□□ -2
XRN1-207ENST00000468894 RNASEK-C17orf49H0YIS7 233 aa2.55□□□□□ -2
XRN1-207ENST00000468894 H3BN98 237 aa2.55□□□□□ -2
XRN1-207ENST00000468894 RFXANKO14593 260 aa2.55□□□□□ -2
XRN1-207ENST00000468894 LIN7AO14910 233 aaPredicted RBP2.55□□□□□ -2
XRN1-207ENST00000468894 RAB29O14966 203 aa2.55□□□□□ -2
XRN1-207ENST00000468894 ZBTB5O15062 677 aa2.55□□□□□ -2
XRN1-207ENST00000468894 ZFYVE9O95405 1425 aa2.55□□□□□ -2
XRN1-207ENST00000468894 FADS2O95864 444 aaKnown RBP2.55□□□□□ -2
XRN1-207ENST00000468894 RPN2P04844 631 aa2.55□□□□□ -2
XRN1-207ENST00000468894 KRT16P08779 473 aa2.55□□□□□ -2
XRN1-207ENST00000468894 TFPTP0C1Z6 253 aa2.55□□□□□ -2
XRN1-207ENST00000468894 UBCP0CG48 685 aaKnown RBP2.55□□□□□ -2
XRN1-207ENST00000468894 ZNF250P15622 560 aa2.55□□□□□ -2
XRN1-207ENST00000468894 F2RP25116 425 aa2.55□□□□□ -2
XRN1-207ENST00000468894 STOMP27105 288 aa2.55□□□□□ -2
XRN1-207ENST00000468894 HMOX2P30519 316 aa2.55□□□□□ -2
XRN1-207ENST00000468894 UGT2B10P36537 528 aa2.55□□□□□ -2
XRN1-207ENST00000468894 GPX4P36969 197 aaPredicted RBP2.55□□□□□ -2
XRN1-207ENST00000468894 TGFBR2P37173 567 aa2.55□□□□□ -2
XRN1-207ENST00000468894 COILP38432 576 aaPredicted RBP2.55□□□□□ -2
XRN1-207ENST00000468894 LRPPRCP42704 1394 aaKnown RBP2.55□□□□□ -2
XRN1-207ENST00000468894 NSG1P42857 185 aa2.55□□□□□ -2
XRN1-207ENST00000468894 MAGEA6P43360 314 aa2.55□□□□□ -2
XRN1-207ENST00000468894 SERPINB8P50452 374 aa2.55□□□□□ -2
XRN1-207ENST00000468894 PSMD4P55036 377 aaKnown RBP2.55□□□□□ -2
XRN1-207ENST00000468894 ERVS71-1P61550 626 aa2.55□□□□□ -2
XRN1-207ENST00000468894 BNIP2Q12982 314 aa2.55□□□□□ -2
XRN1-207ENST00000468894 ZBTB6Q15916 424 aa2.55□□□□□ -2
XRN1-207ENST00000468894 TNXAQ16473 311 aa2.55□□□□□ -2
XRN1-207ENST00000468894 YIF1BQ5BJH7 314 aa2.55□□□□□ -2
XRN1-207ENST00000468894 SLC16A13Q7RTY0 426 aa2.55□□□□□ -2
XRN1-207ENST00000468894 KRTAP13-1Q8IUC0 172 aa2.55□□□□□ -2
XRN1-207ENST00000468894 ZNF502Q8TBZ5 544 aa2.55□□□□□ -2
XRN1-207ENST00000468894 SLC7A13Q8TCU3 470 aa2.55□□□□□ -2
XRN1-207ENST00000468894 DYDC1Q8WWB3 177 aa2.55□□□□□ -2
XRN1-207ENST00000468894 DNAJB3Q8WWF6 145 aa2.55□□□□□ -2
XRN1-207ENST00000468894 RTN4IP1Q8WWV3 396 aaPredicted RBP2.55□□□□□ -2
XRN1-207ENST00000468894 NAPGQ99747 312 aaPredicted RBP2.55□□□□□ -2
XRN1-207ENST00000468894 MAP1LC3CQ9BXW4 147 aa2.55□□□□□ -2
XRN1-207ENST00000468894 BEX2Q9BXY8 128 aa2.55□□□□□ -2
XRN1-207ENST00000468894 ZNF717Q9BY31 904 aaPredicted RBP2.55□□□□□ -2
XRN1-207ENST00000468894 BCL2L14Q9BZR8 327 aa2.55□□□□□ -2
XRN1-207ENST00000468894 SRRQ9GZT4 340 aa2.55□□□□□ -2
XRN1-207ENST00000468894 RACGAP1Q9H0H5 632 aa2.55□□□□□ -2
XRN1-207ENST00000468894 WDR54Q9H977 334 aa2.55□□□□□ -2
XRN1-207ENST00000468894 C19orf12Q9NSK7 152 aa2.55□□□□□ -2
XRN1-207ENST00000468894 NXT1Q9UKK6 140 aaKnown RBP2.55□□□□□ -2
XRN1-207ENST00000468894 FBXL3Q9UKT7 428 aa2.55□□□□□ -2
XRN1-207ENST00000468894 MYH2Q9UKX2 1941 aa2.54□□□□□ -2
XRN1-207ENST00000468894 CAMTA1Q9Y6Y1 1673 aa2.54□□□□□ -2
XRN1-207ENST00000468894 ADGRL3Q9HAR2 1447 aa2.54□□□□□ -2
XRN1-207ENST00000468894 ELP1O95163 1332 aa2.54□□□□□ -2
XRN1-207ENST00000468894 USP42Q9H9J4 1324 aaKnown RBP2.54□□□□□ -2
XRN1-207ENST00000468894 KCNE1BA0A087WTH5 132 aa2.54□□□□□ -2
XRN1-207ENST00000468894 KBTBD11-OT1A0A1B0GTJ5 212 aa2.54□□□□□ -2
XRN1-207ENST00000468894 TMEM114B3SHH9 223 aa2.54□□□□□ -2
XRN1-207ENST00000468894 H0YJW9 148 aa2.54□□□□□ -2
XRN1-207ENST00000468894 LGALS9O00182 355 aa2.54□□□□□ -2
XRN1-207ENST00000468894 AQP9O43315 295 aa2.54□□□□□ -2
XRN1-207ENST00000468894 XRCC2O43543 280 aa2.54□□□□□ -2
XRN1-207ENST00000468894 HUS1O60921 280 aa2.54□□□□□ -2
XRN1-207ENST00000468894 SC5DO75845 299 aa2.54□□□□□ -2
XRN1-207ENST00000468894 OR2J3O76001 311 aa2.54□□□□□ -2
XRN1-207ENST00000468894 VAPBO95292 243 aa2.54□□□□□ -2
XRN1-207ENST00000468894 TSPAN13O95857 204 aa2.54□□□□□ -2
XRN1-207ENST00000468894 RPS17P08708 135 aaKnown RBP2.54□□□□□ -2
XRN1-207ENST00000468894 CD82P27701 267 aa2.54□□□□□ -2
XRN1-207ENST00000468894 GTF2E2P29084 291 aaKnown RBP2.54□□□□□ -2
XRN1-207ENST00000468894 CD79BP40259 229 aa2.54□□□□□ -2
XRN1-207ENST00000468894 MAGEA2P43356 314 aa2.54□□□□□ -2
XRN1-207ENST00000468894 RPL14P50914 215 aaKnown RBP2.54□□□□□ -2
XRN1-207ENST00000468894 UBE2NP61088 152 aaKnown RBP2.54□□□□□ -2
XRN1-207ENST00000468894 PSME3P61289 254 aa2.54□□□□□ -2
XRN1-207ENST00000468894 ATP6V0D1P61421 351 aa2.54□□□□□ -2
XRN1-207ENST00000468894 MRPS25P82663 173 aaKnown RBP2.54□□□□□ -2
XRN1-207ENST00000468894 RAD51Q06609 339 aa2.54□□□□□ -2
XRN1-207ENST00000468894 C2orf54Q08AI8 447 aa2.54□□□□□ -2
XRN1-207ENST00000468894 MED21Q13503 144 aa2.54□□□□□ -2
XRN1-207ENST00000468894 NDUFA5Q16718 116 aa2.54□□□□□ -2
XRN1-207ENST00000468894 TMEM249Q2WGJ8 235 aa2.54□□□□□ -2
XRN1-207ENST00000468894 STUMQ69YW2 141 aa2.54□□□□□ -2
XRN1-207ENST00000468894 REEP3Q6NUK4 255 aa2.54□□□□□ -2
XRN1-207ENST00000468894 C10orf67Q8IYJ2 551 aa2.54□□□□□ -2
XRN1-207ENST00000468894 FAM71AQ8IYT1 594 aa2.54□□□□□ -2
XRN1-207ENST00000468894 ZFP82Q8N141 532 aa2.54□□□□□ -2
XRN1-207ENST00000468894 TRAM1L1Q8N609 369 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms