RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 MAP1LC3AQ9H492 121 aa2.83□□□□□ -1.96
VPS50-209ENST00000467326 ISG20L2Q9H9L3 353 aaKnown RBP2.83□□□□□ -1.96
VPS50-209ENST00000467326 TMEM9BQ9NQ34 198 aa2.83□□□□□ -1.96
VPS50-209ENST00000467326 C12orf4Q9NQ89 552 aa2.83□□□□□ -1.96
VPS50-209ENST00000467326 IMPAD1Q9NX62 359 aa2.83□□□□□ -1.96
VPS50-209ENST00000467326 TAS2R13Q9NYV9 303 aa2.83□□□□□ -1.96
VPS50-209ENST00000467326 DNAJC27Q9NZQ0 273 aa2.83□□□□□ -1.96
VPS50-209ENST00000467326 MLXQ9UH92 298 aa2.83□□□□□ -1.96
VPS50-209ENST00000467326 ZNF391Q9UJN7 358 aa2.83□□□□□ -1.96
VPS50-209ENST00000467326 LSM5Q9Y4Y9 91 aaKnown RBP2.83□□□□□ -1.96
VPS50-209ENST00000467326 V9GY05 133 aa2.83□□□□□ -1.96
VPS50-209ENST00000467326 CCDC171Q6TFL3 1326 aa2.83□□□□□ -1.96
VPS50-209ENST00000467326 MSH6P52701 1360 aa2.83□□□□□ -1.96
VPS50-209ENST00000467326 NCOA3Q9Y6Q9 1424 aa2.83□□□□□ -1.96
VPS50-209ENST00000467326 IGHV3OR16-12A0A075B7B8 117 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 ZNF233A6NK53 670 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 RPL37AP8A6NKH3 93 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 SYCE1LA8MT33 242 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 DISC1C4P0D8 188 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 GABRPO00591 440 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 TAAR5O14804 337 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 DPM1O60762 260 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 CNIH1O95406 144 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 OXTP01178 125 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 IFNA21P01568 189 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 IGHV3-9P01782 118 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 IGHG1P01857 330 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 ATF1P18846 271 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 F2RP25116 425 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 GRPRP30550 384 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 SERPINB1P30740 379 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 PYCR1P32322 319 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 PFN2P35080 140 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 KIR2DS4P43632 304 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 GALR1P47211 349 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 PPOXP50336 477 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 TCL1AP56279 114 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 RAB25P57735 213 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 ERVPABLB-1P60509 514 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 NUTF2P61970 127 aaKnown RBP2.82□□□□□ -1.96
VPS50-209ENST00000467326 BTN3A2P78410 334 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 TNFRSF9Q07011 255 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 QPRTQ15274 297 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 ZNF726P1Q15940 193 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 MICAQ29983 383 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 HLA-DRB5Q30154 266 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 CCDC58Q4VC31 144 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 C14orf28Q4W4Y0 310 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 C11orf71Q6IPW1 123 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 TNFAIP8L2Q6P589 184 aaPredicted RBP2.82□□□□□ -1.96
VPS50-209ENST00000467326 THOC6Q86W42 341 aaKnown RBP2.82□□□□□ -1.96
VPS50-209ENST00000467326 PPP1R27Q86WC6 154 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 RAB43Q86YS6 212 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 CBLN2Q8IUK8 224 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 CD177Q8N6Q3 437 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 C12orf29Q8N999 325 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 TMEM35BQ8NCS4 154 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 OR4F15Q8NGB8 312 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 COQ8AQ8NI60 647 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 NT5CQ8TCD5 201 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 ZFP90Q8TF47 636 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 SDR42E1Q8WUS8 393 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 ITLN1Q8WWA0 313 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 TMEM54Q969K7 222 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 PGLYRP4Q96LB8 373 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 P2RX4Q99571 388 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 DOK1Q99704 481 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 DDA1Q9BW61 102 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 TM2D1Q9BX74 207 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 SRXN1Q9BYN0 137 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 RNF167Q9H6Y7 350 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 SPRR3Q9UBC9 169 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 VPS29Q9UBQ0 182 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 FBXO5Q9UKT4 447 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 ERGIC3Q9Y282 383 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 TP53TG1Q9Y2A0 90 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.82□□□□□ -1.96
VPS50-209ENST00000467326 ZBED9Q6R2W3 1325 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 ZFYVE9O95405 1425 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 FRMPD3Q5JV73 1810 aa2.82□□□□□ -1.96
VPS50-209ENST00000467326 TRAV8-4A0A0B4J246 113 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 EFCAB10A6NFE3 127 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 ZNF705EA8MWA4 302 aaPredicted RBP2.81□□□□□ -1.96
VPS50-209ENST00000467326 K7EMT4 169 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 KLRC4O43908 158 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 FAM189A1O60320 539 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 SEMA4FO95754 770 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 AIFM1O95831 613 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 P01737 135 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 HPNP05981 417 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 HCKP08631 526 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 GTF2F2P13984 249 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 CD99P14209 185 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 GABRG2P18507 467 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 RCC1P18754 421 aaPredicted RBP2.81□□□□□ -1.96
VPS50-209ENST00000467326 ALOX5APP20292 161 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 CRABP2P29373 138 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 RPL12P30050 165 aaKnown RBP2.81□□□□□ -1.96
VPS50-209ENST00000467326 SERPINB5P36952 375 aa2.81□□□□□ -1.96
VPS50-209ENST00000467326 KIR2DS2P43631 304 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms