RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 OOEPA6NGQ2 149 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.74□□□□□ -0.85
CUX1-207ENST00000465461 LGALS8O00214 317 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 PLATP00750 562 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 CDK1P06493 297 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 RPS2P15880 293 aaKnown RBP9.74□□□□□ -0.85
CUX1-207ENST00000465461 HOXB4P17483 251 aaPredicted RBP9.74□□□□□ -0.85
CUX1-207ENST00000465461 HAAOP46952 286 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 SOX2P48431 317 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 TGM4P49221 684 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 CDK5R1Q15078 307 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 FAM90A1Q86YD7 464 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 CALHM1Q8IU99 346 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 MUC20Q8N307 709 aaPredicted RBP9.74□□□□□ -0.85
CUX1-207ENST00000465461 FGFRL1Q8N441 504 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 ZNF485Q8NCK3 441 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 OR13C5Q8NGS8 318 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 OR51F2Q8NH61 342 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 AQP3Q92482 292 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 TMEM186Q96B77 213 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 MYCBPQ99417 103 aaPredicted RBP9.74□□□□□ -0.85
CUX1-207ENST00000465461 MMP26Q9NRE1 261 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 CTSZQ9UBR2 303 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 HHLA2Q9UM44 414 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 ZANQ9Y493 2812 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 FN1P02751 2386 aaKnown RBP9.73□□□□□ -0.85
CUX1-207ENST00000465461 OR5B21A6NL26 309 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 DHRS7CA6NNS2 312 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 F5H0A9 414 aaPredicted RBP9.73□□□□□ -0.85
CUX1-207ENST00000465461 TRAPPC2LH3BP13 241 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 TNFRSF13BO14836 293 aaPredicted RBP9.73□□□□□ -0.85
CUX1-207ENST00000465461 OGG1O15527 345 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 FCN3O75636 299 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 CCDC159P0C7I6 412 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 ZNF20P17024 532 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 ATF1P18846 271 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 HSPA13P48723 471 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 DVL1P1P54792 670 aaPredicted RBP9.73□□□□□ -0.85
CUX1-207ENST00000465461 MRPL28Q13084 256 aaKnown RBP9.73□□□□□ -0.85
CUX1-207ENST00000465461 MED21Q13503 144 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 CR1LQ2VPA4 569 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 FAM120AOSQ5T036 256 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 FAHD2BQ6P2I3 314 aaPredicted RBP9.73□□□□□ -0.85
CUX1-207ENST00000465461 RPL22L1Q6P5R6 122 aaKnown RBP9.73□□□□□ -0.85
CUX1-207ENST00000465461 GLCCI1Q86VQ1 547 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 NANOGP1Q8N7R0 232 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 OR52N1Q8NH53 320 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 TSEN15Q8WW01 171 aaKnown RBP9.73□□□□□ -0.85
CUX1-207ENST00000465461 RFT1Q96AA3 541 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 ORAI1Q96D31 301 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 FAHD2AQ96GK7 314 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 SPACA5Q96QH8 159 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 CCL13Q99616 98 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 CHST5Q9GZS9 411 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 COMMD4Q9H0A8 199 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 SCN3BQ9NY72 215 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 RAB26Q9ULW5 256 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 SLC7A11Q9UPY5 501 aa9.73□□□□□ -0.85
CUX1-207ENST00000465461 TLN2Q9Y4G6 2542 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 TRAV38-1A0A0B4J264 116 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 TMEM212A6NML5 194 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 KIAA1324LA8MWY0 1029 aaPredicted RBP9.72□□□□□ -0.85
CUX1-207ENST00000465461 SRRM5B3KS81 715 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 MYL12BO14950 172 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 ADAM20O43506 726 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 CRLF1O75462 422 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 SERPINA3P01011 423 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 AVPP01185 164 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 ZNF12P17014 697 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 AMY2BP19961 511 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 GLRA1P23415 457 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 SLC35A2P78381 396 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 TEX36Q5VZQ5 186 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 ZNF841Q6ZN19 808 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 DCDC5Q6ZRR9 648 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 CCDC54Q8NEL0 328 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 OR8B3Q8NGG8 313 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 OR13C9Q8NGT0 318 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 RPS4Y2Q8TD47 263 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 GHSRQ92847 366 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 MYDGFQ969H8 173 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 ITFG2Q969R8 447 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 NEIL1Q96FI4 390 aaPredicted RBP9.72□□□□□ -0.85
CUX1-207ENST00000465461 OR5M11Q96RB7 305 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 OR8B2Q96RD0 313 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 NKX3-1Q99801 234 aaPredicted RBP9.72□□□□□ -0.85
CUX1-207ENST00000465461 SSBP3Q9BWW4 388 aaPredicted RBP9.72□□□□□ -0.85
CUX1-207ENST00000465461 DNAJB11Q9UBS4 358 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 MIOXQ9UGB7 285 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 DHDHQ9UQ10 334 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 TPRKBQ9Y3C4 175 aa9.72□□□□□ -0.85
CUX1-207ENST00000465461 F8VVB4 439 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 F8VWA3 439 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 J3QT63 122 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 FOXH1O75593 365 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 GATBO75879 557 aaKnown RBP9.71□□□□□ -0.86
CUX1-207ENST00000465461 MT-ND2P03891 347 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 RPSAP08865 295 aaKnown RBP9.71□□□□□ -0.86
CUX1-207ENST00000465461 CALCBP10092 127 aa9.71□□□□□ -0.86
CUX1-207ENST00000465461 SELLP14151 372 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms