RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SLC35A2P78381 396 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 RNLSQ5VYX0 342 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF573Q86YE8 665 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 NANOGP1Q8N7R0 232 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF485Q8NCK3 441 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 OR10Z1Q8NGY1 313 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 OR51F2Q8NH61 342 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF671Q8TAW3 534 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 RPS4Y2Q8TD47 263 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 TECTBQ96PL2 329 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 MIOXQ9UGB7 285 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 KCNS2Q9ULS6 477 aa12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 SIRT4Q9Y6E7 314 aaPredicted RBP12.15□□□□□ -0.46
SQSTM1-205ENST00000464493 SONP18583 2426 aaKnown RBP12.15□□□□□ -0.47
SQSTM1-205ENST00000464493 PQLC2LA1A4F0 135 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 INAFM1C9JVW0 142 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 F5H0A9 414 aaPredicted RBP12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 PLPP2O43688 288 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 RHBDL1O75783 438 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 LALBAP00709 142 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 RPS2P15880 293 aaKnown RBP12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 HAAOP46952 286 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 FUT6P51993 359 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 DVL1P1P54792 670 aaPredicted RBP12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 WNT4P56705 351 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 MICBQ29980 383 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 TEX36Q5VZQ5 186 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 HAGHLQ6PII5 290 aaPredicted RBP12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 DCDC5Q6ZRR9 648 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 UTS2BQ765I0 119 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 TRMT10AQ8TBZ6 339 aaKnown RBP12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 NPRL2Q8WTW4 380 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 AQP3Q92482 292 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 SMIM19Q96E16 107 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 CDCA4Q9BXL8 241 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 Q9H521 79 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 DUSP21Q9H596 190 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 PAK1IP1Q9NWT1 392 aaPredicted RBP12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 PCDHGB5Q9Y5G0 923 aa12.14□□□□□ -0.47
SQSTM1-205ENST00000464493 IGHV3OR15-7A0A075B7D8 119 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 FAM230AA0A1W2PPH8 454 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 SRRM5B3KS81 715 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 AKR7A2O43488 359 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 DENRO43583 198 aaKnown RBP12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 NDUFA2O43678 99 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 MUC1P15941 1255 aaPredicted RBP12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 CRHBPP24387 322 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 TAS2R43P59537 309 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 GMFBP60983 142 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 CNN3Q15417 329 aaKnown RBP12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 RBM48Q5RL73 367 aaKnown RBP12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 DMKNQ6E0U4 476 aaPredicted RBP12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 NLRC3Q7RTR2 1065 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 GLCCI1Q86VQ1 547 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 FAM90A1Q86YD7 464 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 SERPINA12Q8IW75 414 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 GPR148Q8TDV2 347 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 TSEN15Q8WW01 171 aaKnown RBP12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 SGCDQ92629 289 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 GHSRQ92847 366 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 TMEM186Q96B77 213 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 NEIL1Q96FI4 390 aaPredicted RBP12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 MND1Q9BWT6 205 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 HIF1ANQ9NWT6 349 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 DHDHQ9UQ10 334 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 ZNF281Q9Y2X9 895 aa12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 FN1P02751 2386 aaKnown RBP12.13□□□□□ -0.47
SQSTM1-205ENST00000464493 ANK3Q12955 4377 aaKnown RBP12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 NF1P21359 2839 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 TRAV20A0A0B4J274 112 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 IGKV1-9A0A0C4DH69 117 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 J3QT63 122 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 TNFRSF13BO14836 293 aaPredicted RBP12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 RGS10O43665 173 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 FOXH1O75593 365 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 GYPAP02724 150 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 ATF1P18846 271 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 PRKACBP22694 351 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 GLRA1P23415 457 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 ZFP36P26651 326 aaKnown RBP12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 SEC61A1P61619 476 aaKnown RBP12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 LCN2P80188 198 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 ESCO2Q56NI9 601 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 LYPD2Q6UXB3 125 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 ANGPTL5Q86XS5 388 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 PARP16Q8N5Y8 322 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 ZFP41Q8N8Y5 198 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 DNAAF1Q8NEP3 725 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 OR8B3Q8NGG8 313 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 OR5D14Q8NGL3 314 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 RGP1Q92546 391 aaPredicted RBP12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 C12orf43Q96C57 262 aaKnown RBP12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 SEH1LQ96EE3 360 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 BORCS8Q96FH0 119 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 OR8B2Q96RD0 313 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 WDR13Q9H1Z4 485 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 ZCCHC4Q9H5U6 513 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 TMEM160Q9NX00 188 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 DNAJB11Q9UBS4 358 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms