RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 OR10H4Q8NGA5 316 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 OR13C5Q8NGS8 318 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 OR2T4Q8NH00 348 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 OR10AC1Q8NH08 325 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 OR52N5Q8NH56 324 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SPRYD4Q8WW59 207 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 TRUB1Q8WWH5 349 aaKnown RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 S100PBPQ96BU1 408 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ORAI1Q96D31 301 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 DTNBP1Q96EV8 351 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 INTS14Q96SY0 518 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 COPS4Q9BT78 406 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ABHD6Q9BV23 337 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ACTR6Q9GZN1 396 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 OBP2BQ9NPH6 170 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 PLCXD1Q9NUJ7 323 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ACOXLQ9NUZ1 547 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 HAO2Q9NYQ3 351 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 EMC3Q9P0I2 261 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 CYB5R1Q9UHQ9 305 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ENOPH1Q9UHY7 261 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 KCNS2Q9ULS6 477 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 TRRAPQ9Y4A5 3859 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 CR1P17927 2039 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 PNMA8CA0A1B0GUJ8 204 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 GAGE12JA6NER3 117 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SHISA9B4DS77 424 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF587BE7ETH6 402 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 VENTXO95231 258 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 HLA-DQA2P01906 255 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 TFAP2AP05549 437 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 CCDC159P0C7I6 412 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 PIPP12273 146 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 LYL1P12980 280 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ATP6V1B1P15313 513 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 MSR1P21757 451 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 CALCRP30988 508 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 TGFBR1P36897 503 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 WNT5AP41221 380 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 KIR3DL2P43630 455 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ERVS71-1P61550 626 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 EMX1Q04741 257 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 EIF2B1Q14232 305 aaKnown RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 TAB1Q15750 504 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 STK11Q15831 433 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SSX1Q16384 188 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 IZUMO4Q1ZYL8 232 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 KRTAP27-1Q3LI81 207 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 KCTD21Q4G0X4 260 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 PABPC1L2AQ5JQF8 200 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SLC35D3Q5M8T2 416 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 FAM27BQ5VT28 67 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 AGAP6Q5VW22 663 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 MEDAGQ5VYS4 303 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 OR7E24Q6IFN5 339 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 CLEC2AQ6UVW9 174 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 IL17RELQ6ZVW7 336 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SLC16A9Q7RTY1 509 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 PRSS45Q7RTY3 260 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 GID4Q8IVV7 300 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 PRSS35Q8N3Z0 413 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 C3orf56Q8N813 242 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 POMGNT2Q8NAT1 580 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF540Q8NDQ6 660 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 STEAP2Q8NFT2 490 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 OTOSQ8NHW6 89 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 FAM216AQ8WUB2 273 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 THEM6Q8WUY1 208 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 RGP1Q92546 391 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SLAMF6Q96DU3 332 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 PELI1Q96FA3 418 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 C4orf36Q96KX1 117 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 OPALINQ96PE5 141 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 RBP7Q96R05 134 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 OR8B4Q96RC9 309 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 CNN2Q99439 309 aaKnown RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 OR2H1Q9GZK4 316 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 NAA50Q9GZZ1 169 aaKnown RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 PPP1R3EQ9H7J1 279 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ACOT13Q9NPJ3 140 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SLC17A5Q9NRA2 495 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 CISD1Q9NZ45 108 aaKnown RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 MDFICQ9P1T7 246 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 UPB1Q9UBR1 384 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 WARS2Q9UGM6 360 aaKnown RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 DIMT1Q9UNQ2 313 aaKnown RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SLC22A13Q9Y226 551 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SLC25A15Q9Y619 301 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 IGHV1-18A0A0C4DH31 117 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 CENPBD1B2RD01 187 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 FAM157AC9JC47 383 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 H7C417 338 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 SYNGR3O43761 229 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 MPZL2O60487 215 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 KRT33AO76009 404 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 RPP14O95059 124 aaKnown RBP3.04□□□□□ -1.92
SCFD1-204ENST00000463622 RAB36O95755 333 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 NGFP01138 241 aa3.04□□□□□ -1.92
SCFD1-204ENST00000463622 CSF3P09919 207 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms