RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 EGR1P18146 543 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 TGM4P49221 684 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 OR12D2P58182 307 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 SEC61A1P61619 476 aaKnown RBP10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 PAX2Q02962 417 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 ZNF841Q6ZN19 808 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 FAM90A1Q86YD7 464 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 DEFB108BQ8NET1 73 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 NANPQ8TBE9 248 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 CHST5Q9GZS9 411 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 SLC7A11Q9UPY5 501 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 POLDIP2Q9Y2S7 368 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 A0A0A6YYJ9 748 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 J3QLW9 94 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 J3QT63 122 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 ADAM20O43506 726 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 ENSAO43768 121 aaKnown RBP10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 ZNF19P17023 458 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 GBX2P52951 348 aaPredicted RBP10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 PAX8Q06710 450 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 ALKBH1Q13686 389 aaKnown RBP10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 CEP78Q5JTW2 689 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 IL17RELQ6ZVW7 336 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 UTS2BQ765I0 119 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 SLC36A1Q7Z2H8 476 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 FBLIM1Q8WUP2 373 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 RAB40AQ8WXH6 277 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 AQP3Q92482 292 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 RPL3LQ92901 407 aaKnown RBP10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 DACT3Q96B18 629 aaPredicted RBP10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 ZNF649Q9BS31 505 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 PKIBQ9C010 78 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 VCX3BQ9H321 246 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 C7orf69Q9H7B7 122 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 METTL17Q9H7H0 456 aaPredicted RBP10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 FRRS1LQ9P0K9 344 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 HHLA2Q9UM44 414 aa10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 DIMT1Q9UNQ2 313 aaKnown RBP10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 CAB39Q9Y376 341 aaPredicted RBP10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 EXOSC1Q9Y3B2 195 aaKnown RBP10.89□□□□□ -0.67
R3HDM1-213ENST00000463230 DOCK11Q5JSL3 2073 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 KIR2DS1A0A191URI9 304 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 NKX6-3A6NJ46 265 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 TMEM212A6NML5 194 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 TRAPPC2LH3BP13 241 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 NOS1APO75052 506 aaPredicted RBP10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 FSHBP01225 129 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 LIPFP07098 398 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 PIPP12273 146 aaPredicted RBP10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 MPZP25189 248 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 CNN3Q15417 329 aaKnown RBP10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 STUMQ69YW2 141 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 LYPD2Q6UXB3 125 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 TMPRSS11AQ6ZMR5 421 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 DNAAF1Q8NEP3 725 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 CNOT2Q9NZN8 540 aaKnown RBP10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 OPN4Q9UHM6 478 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 MYRFQ9Y2G1 1151 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 LOC105371242A0A075B767 164 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 EFCAB10A6NFE3 127 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 OR4C45A6NMZ5 311 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 RBMXP38159 391 aaKnown RBP10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 FUT6P51993 359 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 CCDC58Q4VC31 144 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 SFRP4Q6FHJ7 346 aaPredicted RBP10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 LHFPL3Q86UP9 236 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 POC1AQ8NBT0 407 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 MED30Q96HR3 178 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 NEK6Q9HC98 313 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 AMBNQ9NP70 447 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 GPR173Q9NS66 373 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 PLCXD1Q9NUJ7 323 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 CTSZQ9UBR2 303 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 DNAJB11Q9UBS4 358 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 AUP1Q9Y679 476 aa10.88□□□□□ -0.67
R3HDM1-213ENST00000463230 JMJD1CQ15652 2540 aa10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 PHF1O43189 567 aaPredicted RBP10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 GYPAP02724 150 aa10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 ADRA2CP18825 462 aa10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 MYL12AP19105 171 aa10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 PRKACBP22694 351 aa10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 NANOS3P60323 173 aaKnown RBP10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 CNIH3Q8TBE1 160 aa10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 TFAP2CQ92754 450 aa10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 NUDT16L1Q9BRJ7 211 aaKnown RBP10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 COMMD4Q9H0A8 199 aa10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 RASSF4Q9H2L5 321 aa10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 MMP26Q9NRE1 261 aa10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 NLKQ9UBE8 527 aa10.87□□□□□ -0.67
R3HDM1-213ENST00000463230 LIMS3P0CW19 117 aa10.86□□□□□ -0.67
R3HDM1-213ENST00000463230 LIMS4P0CW20 117 aa10.86□□□□□ -0.67
R3HDM1-213ENST00000463230 ZNF20P17024 532 aa10.86□□□□□ -0.67
R3HDM1-213ENST00000463230 IL24Q13007 206 aa10.86□□□□□ -0.67
R3HDM1-213ENST00000463230 SMN1Q16637 294 aaKnown RBP10.86□□□□□ -0.67
R3HDM1-213ENST00000463230 SMIM21Q3B7S5 101 aa10.86□□□□□ -0.67
R3HDM1-213ENST00000463230 HAGHLQ6PII5 290 aaPredicted RBP10.86□□□□□ -0.67
R3HDM1-213ENST00000463230 C1orf229Q6ZS94 237 aaPredicted RBP10.86□□□□□ -0.67
R3HDM1-213ENST00000463230 PNLDC1Q8NA58 520 aaKnown RBP10.86□□□□□ -0.67
R3HDM1-213ENST00000463230 C19orf18Q8NEA5 215 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms