RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SIKE1Q9BRV8 207 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 FRMD8P1Q9BZ68 369 aaPredicted RBP1.78□□□□□ -2.12
HDAC6-212ENST00000461608 ULBP2Q9BZM5 246 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 COA1Q9GZY4 146 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 PORCNQ9H237 461 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 GOLPH3Q9H4A6 298 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 PRORYQ9H606 182 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 CSNK1G1Q9HCP0 422 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 FBXO6Q9NRD1 293 aaPredicted RBP1.78□□□□□ -2.12
HDAC6-212ENST00000461608 RBFOX1Q9NWB1 397 aaKnown RBP1.78□□□□□ -2.12
HDAC6-212ENST00000461608 VAX2Q9UIW0 290 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 STK38LQ9Y2H1 464 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 PCM1Q15154 2024 aa1.78□□□□□ -2.13
HDAC6-212ENST00000461608 ISPDA4D126 451 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 GOLGA6L4A6NEF3 574 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 C9JQL5 133 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 J3QT63 122 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 OR7C2O60412 319 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 HLA-GP17693 338 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 NELFEP18615 380 aaKnown RBP1.77□□□□□ -2.13
HDAC6-212ENST00000461608 PRKACBP22694 351 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 PMELP40967 661 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 RGS6P49758 472 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 SLC18A1P54219 525 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 OR12D2P58182 307 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 TAS2R43P59537 309 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 PPP1CAP62136 330 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 FAM27D1Q5T7N8 215 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 DEGS2Q6QHC5 323 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 UGT2A3Q6UWM9 527 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 RBM45Q8IUH3 476 aaKnown RBP1.77□□□□□ -2.13
HDAC6-212ENST00000461608 ORMDL3Q8N138 153 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 LYPD1Q8N2G4 141 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 SLC35G3Q8N808 338 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 ZNF615Q8N8J6 731 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 CYB561A3Q8NBI2 242 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 OR52N1Q8NH53 320 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 LGALS14Q8TCE9 139 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 CDKL2Q92772 493 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 RILPQ96NA2 401 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 OR2M4Q96R27 311 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 ZNF649Q9BS31 505 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 TIMM29Q9BSF4 260 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 TSGA10Q9BZW7 698 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 RAB1BQ9H0U4 201 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 METTL8Q9H825 291 aaKnown RBP1.77□□□□□ -2.13
HDAC6-212ENST00000461608 ANKHQ9HCJ1 492 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 ORC6Q9Y5N6 252 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 DOCK8Q8NF50 2099 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 ARID1AO14497 2285 aa1.77□□□□□ -2.13
HDAC6-212ENST00000461608 CABIN1Q9Y6J0 2220 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 TRAV8-7A0A075B6U6 113 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 CCL15-CCL14A0A0B4J2E2 113 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 LOC100506127A0A0U1RQW1 187 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 FAM240AA0A1B0GVK7 77 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 COLCA2A8K830 154 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 UPK2O00526 184 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 SLC37A4O43826 429 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 CCDC22O60826 627 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 ZMPSTE24O75844 475 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 RPN2P04844 631 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 OR4Q2P0C623 313 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 SPAM1P38567 509 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 KIR3DL2P43630 455 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 VSNL1P62760 191 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 ZNF616Q08AN1 781 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 DMC1Q14565 340 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 MAD2L1BPQ15013 274 aaPredicted RBP1.76□□□□□ -2.13
HDAC6-212ENST00000461608 SHHQ15465 462 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 USF2Q15853 346 aaPredicted RBP1.76□□□□□ -2.13
HDAC6-212ENST00000461608 CCL15Q16663 113 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 NDUFAF6Q330K2 333 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 Q3ZCU0 254 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 FBXL19-AS1Q494R0 122 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 ATP6AP1LQ52LC2 224 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 DNLZQ5SXM8 178 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 RESP18Q5W5W9 173 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 FAM104BQ5XKR9 115 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 PRSS54Q6PEW0 395 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 SPINT4Q6UDR6 99 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 CLEC19AQ6UXS0 136 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 SSX6Q7RTT6 188 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 SETD3Q86TU7 594 aaPredicted RBP1.76□□□□□ -2.13
HDAC6-212ENST00000461608 ZNF101Q8IZC7 436 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 RNF182Q8N6D2 247 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 LRRC52Q8N7C0 313 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 ZNF645Q8N7E2 425 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 ST20-AS1Q8NBB2 130 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 SLC26A10Q8NG04 563 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 KLF14Q8TD94 323 aaPredicted RBP1.76□□□□□ -2.13
HDAC6-212ENST00000461608 ORAOV1Q8WV07 137 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 S100PBPQ96BU1 408 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 NEURL3Q96EH8 262 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 IP6K3Q96PC2 410 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 TMED9Q9BVK6 235 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 CHID1Q9BWS9 393 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 RSPO3Q9BXY4 272 aaPredicted RBP1.76□□□□□ -2.13
HDAC6-212ENST00000461608 NLE1Q9NVX2 485 aaPredicted RBP1.76□□□□□ -2.13
HDAC6-212ENST00000461608 SDHAF2Q9NX18 166 aa1.76□□□□□ -2.13
HDAC6-212ENST00000461608 IL37Q9NZH6 218 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms