RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 FOXRED1Q96CU9 486 aaPredicted RBP8.28□□□□□ -1.08
C9orf78-203ENST00000461539 DGCR14Q96DF8 476 aaKnown RBP8.28□□□□□ -1.08
C9orf78-203ENST00000461539 SORCS2Q96PQ0 1159 aa8.28□□□□□ -1.08
C9orf78-203ENST00000461539 FAM192AQ9GZU8 254 aa8.28□□□□□ -1.08
C9orf78-203ENST00000461539 OR51I2Q9H344 312 aa8.28□□□□□ -1.08
C9orf78-203ENST00000461539 METTL17Q9H7H0 456 aaPredicted RBP8.28□□□□□ -1.08
C9orf78-203ENST00000461539 FN3KRPQ9HA64 309 aa8.28□□□□□ -1.08
C9orf78-203ENST00000461539 PLGRKTQ9HBL7 147 aa8.28□□□□□ -1.08
C9orf78-203ENST00000461539 C1orf123Q9NWV4 160 aa8.28□□□□□ -1.08
C9orf78-203ENST00000461539 PLEKHA6Q9Y2H5 1048 aa8.28□□□□□ -1.08
C9orf78-203ENST00000461539 V9GY05 133 aa8.28□□□□□ -1.08
C9orf78-203ENST00000461539 hCG_1807616A0A1W2PRN6 198 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 NOTOA8MTQ0 251 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 J3QT63 122 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 ZNF701M0R085 212 aaPredicted RBP8.27□□□□□ -1.09
C9orf78-203ENST00000461539 CDIPTO14735 213 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 SPRY1O43609 319 aaPredicted RBP8.27□□□□□ -1.09
C9orf78-203ENST00000461539 ANGPTL7O43827 346 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 CDC14BO60729 498 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 CYB5AP00167 134 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 HPXP02790 462 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 OR3A4PP47883 348 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 PDZK1IP1Q13113 114 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 HNRNPA0Q13151 305 aaKnown RBP8.27□□□□□ -1.09
C9orf78-203ENST00000461539 RAB11BQ15907 218 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 FAM76BQ5HYJ3 339 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 HES5Q5TA89 166 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 FOXB2Q5VYV0 432 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 ZNF826PQ6ZT77 177 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 SLC25A26Q70HW3 274 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 CALHM1Q8IU99 346 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 CDH26Q8IXH8 852 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 SCCPDHQ8NBX0 429 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 OR11L1Q8NGX0 322 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 NEU4Q8WWR8 484 aaPredicted RBP8.27□□□□□ -1.09
C9orf78-203ENST00000461539 S100A13Q99584 98 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 GFI1Q99684 422 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 UQCC2Q9BRT2 126 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 CNTD2Q9H8S5 307 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 ELL3Q9HB65 397 aaPredicted RBP8.27□□□□□ -1.09
C9orf78-203ENST00000461539 TREM2Q9NZC2 230 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 EDARQ9UNE0 448 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 ING4Q9UNL4 249 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 CADP27708 2225 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 RTTNQ86VV8 2226 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 FLNCQ14315 2725 aa8.27□□□□□ -1.09
C9orf78-203ENST00000461539 HELZ2Q9BYK8 2649 aaKnown RBP8.27□□□□□ -1.09
C9orf78-203ENST00000461539 FASNP49327 2511 aaKnown RBP8.27□□□□□ -1.09
C9orf78-203ENST00000461539 A0A0G2JK05 382 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 IGHV1-69-2A0A0G2JMI3 117 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 IFITM5A6NNB3 132 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 OVOL3O00110 214 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 AIPO00170 330 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 SYNGR1O43759 233 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 PTBP3O95758 552 aaKnown RBP8.26□□□□□ -1.09
C9orf78-203ENST00000461539 SLC2A2P11168 524 aaPredicted RBP8.26□□□□□ -1.09
C9orf78-203ENST00000461539 IRF2P14316 349 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 HTR2CP28335 458 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 PMELP40967 661 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 PTGFRP43088 359 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 GATA4P43694 442 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 RORCP51449 518 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 ZP1P60852 638 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 GMFBP60983 142 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 P2RY14Q15391 338 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 C1orf100Q5SVJ3 147 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 IDNKQ5T6J7 187 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 AWAT2Q6E213 333 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 SFXN4Q6P4A7 337 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 CRIP3Q6Q6R5 217 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 GLIPR1L1Q6UWM5 242 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 NR2C2APQ86WQ0 139 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 LYPD6Q86Y78 171 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 C11orf53Q8IXP5 236 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 MKXQ8IYA7 352 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 BOLLQ8N9W6 283 aaKnown RBP8.26□□□□□ -1.09
C9orf78-203ENST00000461539 OR4D6Q8NGJ1 314 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 OR6M1Q8NGM8 313 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 OR51F2Q8NH61 342 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 ZNF671Q8TAW3 534 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 LRRC29Q8WV35 223 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 IGFBPL1Q8WX77 278 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 AQP3Q92482 292 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 CCL17Q92583 94 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 ERGIC1Q969X5 290 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 SLAMF9Q96A28 289 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 SLC25A46Q96AG3 418 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 DCUN1D5Q9BTE7 237 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 PKIBQ9C010 78 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 TLNRD1Q9H1K6 362 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 STEAP1Q9UHE8 339 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 DAPK2Q9UIK4 370 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 PPP1R3CQ9UQK1 317 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 MRPS28Q9Y2Q9 187 aaKnown RBP8.26□□□□□ -1.09
C9orf78-203ENST00000461539 POLDIP2Q9Y2S7 368 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 CACNG2Q9Y698 323 aa8.26□□□□□ -1.09
C9orf78-203ENST00000461539 LRRC30A6NM36 301 aa8.25□□□□□ -1.09
C9orf78-203ENST00000461539 LYNX1G3V0Z9 82 aa8.25□□□□□ -1.09
C9orf78-203ENST00000461539 TRAPPC2LH3BP13 241 aa8.25□□□□□ -1.09
C9orf78-203ENST00000461539 SLC17A2O00624 439 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms