RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 BTBD17A6NE02 478 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 RBP2P50120 134 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 CSRP2Q16527 193 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 NOXO1Q8NFA2 376 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 OR4A4PQ8NGN8 299 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 OR1J2Q8NGS2 313 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 NCOA6Q14686 2063 aaPredicted RBP13.6□□□□□ -0.23
LMNB1-203ENST00000460265 A0A0B4J2A0 478 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 SDCBPO00560 298 aaPredicted RBP13.6□□□□□ -0.23
LMNB1-203ENST00000460265 CXCL13O43927 109 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 STK17BO94768 372 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 KNG1P01042 644 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 TTRP02766 147 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 CD1AP06126 327 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 ERCC1P07992 297 aaPredicted RBP13.6□□□□□ -0.23
LMNB1-203ENST00000460265 DBHP09172 617 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 FCGR2AP12318 317 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 TPT1P13693 172 aaKnown RBP13.6□□□□□ -0.23
LMNB1-203ENST00000460265 FAHP16930 419 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 SUMO3P55854 103 aaPredicted RBP13.6□□□□□ -0.23
LMNB1-203ENST00000460265 SPCS3P61009 180 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 ALKBH2Q6NS38 261 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 CLDN23Q96B33 292 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 C20orf24Q9BUV8 137 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 SHPKQ9UHJ6 478 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 H7C1Q1 480 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 DAOP14920 347 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 CD80P33681 288 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 WIPI1Q5MNZ9 446 aaPredicted RBP13.6□□□□□ -0.23
LMNB1-203ENST00000460265 GPR137CQ8N3F9 429 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 CPNE4Q96A23 557 aaPredicted RBP13.6□□□□□ -0.23
LMNB1-203ENST00000460265 SEH1LQ96EE3 360 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 TMEM59Q9BXS4 323 aa13.6□□□□□ -0.23
LMNB1-203ENST00000460265 NXT1Q9UKK6 140 aaKnown RBP13.6□□□□□ -0.23
LMNB1-203ENST00000460265 AMY2BP19961 511 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 HRH1P35367 487 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 CASRP41180 1078 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 GLP1RP43220 463 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 CARD18P57730 90 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 ROM1Q03395 351 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 ZBTB8AQ96BR9 441 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 CMTM3Q96MX0 182 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 OR51B6Q9H340 312 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 RNF122Q9H9V4 155 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 MMP26Q9NRE1 261 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 RCC2Q9P258 522 aaKnown RBP13.59□□□□□ -0.23
LMNB1-203ENST00000460265 A0A1W2PPH5 198 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 RNASEK-C17orf49H0YIS7 233 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 OR4E1P0C645 316 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 PNLIPP16233 465 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 ATP1B3P54709 279 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 RELQ04864 619 aaPredicted RBP13.59□□□□□ -0.23
LMNB1-203ENST00000460265 TMEM164Q5U3C3 297 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 PLXDC2Q6UX71 529 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 CLEC9AQ6UXN8 241 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 C1orf210Q8IVY1 113 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 FAM24BQ8N5W8 94 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 IL22RA1Q8N6P7 574 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 OR2AE1Q8NHA4 323 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 POC1BQ8TC44 478 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 ST7LQ8TDW4 575 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 SULT4A1Q9BR01 284 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 UTP23Q9BRU9 249 aaKnown RBP13.59□□□□□ -0.23
LMNB1-203ENST00000460265 NICN1Q9BSH3 213 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 RAB22AQ9UL26 194 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 NPY4RP50391 375 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 PLGLB1Q02325 96 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 IL11RAQ14626 422 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 SLC9A3R2Q15599 337 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 PYY3Q5JQD4 70 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 ZNF468Q5VIY5 522 aaPredicted RBP13.59□□□□□ -0.23
LMNB1-203ENST00000460265 OR8B12Q8NGG6 310 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 RNF133Q8WVZ7 376 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 OIT3Q8WWZ8 545 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 FOXRED1Q96CU9 486 aaPredicted RBP13.59□□□□□ -0.23
LMNB1-203ENST00000460265 URM1Q9BTM9 101 aaKnown RBP13.59□□□□□ -0.23
LMNB1-203ENST00000460265 METTL8Q9H825 291 aaKnown RBP13.59□□□□□ -0.23
LMNB1-203ENST00000460265 HS3ST3B1Q9Y662 390 aa13.59□□□□□ -0.23
LMNB1-203ENST00000460265 PCNX2A6NKB5 2137 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 SPINK2P20155 84 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 AGAP20933 346 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 BLVRBP30043 206 aaPredicted RBP13.58□□□□□ -0.24
LMNB1-203ENST00000460265 OR3A4PP47883 348 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 HTR5AP47898 357 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 PCP4P48539 62 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 ZNF813Q6ZN06 617 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 ARRDC1Q8N5I2 433 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 OR4K15Q8NH41 348 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 SUCNR1Q9BXA5 334 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 PCDHGA1Q9Y5H4 931 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 A0A087X0M5 115 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 A0A1B0GX30 115 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 GLI4P10075 376 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 NR2C1P13056 603 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 B4GALT1P15291 398 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 NDUFA6P56556 154 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 CSNK2A1P68400 391 aaPredicted RBP13.58□□□□□ -0.24
LMNB1-203ENST00000460265 C10orf91Q5T1B1 145 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 FAM219AQ8IW50 185 aa13.58□□□□□ -0.24
LMNB1-203ENST00000460265 BAP18Q8IXM2 172 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms