RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 HTR1AP08908 422 aa17.26■□□□□ 0.35
VARS-218ENST00000459667 ZNF19P17023 458 aa17.26■□□□□ 0.35
VARS-218ENST00000459667 MRPL28Q13084 256 aaKnown RBP17.26■□□□□ 0.35
VARS-218ENST00000459667 LHFPL3Q86UP9 236 aa17.26■□□□□ 0.35
VARS-218ENST00000459667 SYS1Q8N2H4 156 aa17.26■□□□□ 0.35
VARS-218ENST00000459667 OR2G2Q8NGZ5 317 aa17.26■□□□□ 0.35
VARS-218ENST00000459667 NRG4Q8WWG1 115 aa17.26■□□□□ 0.35
VARS-218ENST00000459667 RAB40AQ8WXH6 277 aa17.26■□□□□ 0.35
VARS-218ENST00000459667 C12orf43Q96C57 262 aaKnown RBP17.26■□□□□ 0.35
VARS-218ENST00000459667 SEH1LQ96EE3 360 aa17.26■□□□□ 0.35
VARS-218ENST00000459667 C4orf36Q96KX1 117 aa17.26■□□□□ 0.35
VARS-218ENST00000459667 MDFIQ99750 246 aa17.26■□□□□ 0.35
VARS-218ENST00000459667 WDR13Q9H1Z4 485 aa17.26■□□□□ 0.35
VARS-218ENST00000459667 DNAJB11Q9UBS4 358 aa17.26■□□□□ 0.35
VARS-218ENST00000459667 MXRA5Q9NR99 2828 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 ANKRD61A6NGH8 418 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 TMPRSS2O15393 492 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 RHBDL1O75783 438 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 EPHA1P21709 976 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 DCKP27707 260 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 MED21Q13503 144 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 RIPK1Q13546 671 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 ARMCX4Q5H9R4 360 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 FDX2Q6P4F2 183 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 HAGHLQ6PII5 290 aaPredicted RBP17.25■□□□□ 0.35
VARS-218ENST00000459667 HAVCR2Q8TDQ0 301 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 TFAP2CQ92754 450 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 DACT3Q96B18 629 aaPredicted RBP17.25■□□□□ 0.35
VARS-218ENST00000459667 PELI1Q96FA3 418 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 NUDT16L1Q9BRJ7 211 aaKnown RBP17.25■□□□□ 0.35
VARS-218ENST00000459667 OCEL1Q9H607 264 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 SMURF1Q9HCE7 757 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 FGF20Q9NP95 211 aaPredicted RBP17.25■□□□□ 0.35
VARS-218ENST00000459667 ERVK13-1Q9NX77 482 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 KAAG1Q9UBP8 84 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 ATRQ13535 2644 aa17.25■□□□□ 0.35
VARS-218ENST00000459667 FSHBP01225 129 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 GNAO1P09471 354 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 MYL12AP19105 171 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 AQP4P55087 323 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 NANOS3P60323 173 aaKnown RBP17.24■□□□□ 0.35
VARS-218ENST00000459667 PAX8Q06710 450 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 RDH10Q8IZV5 341 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 ZNF671Q8TAW3 534 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 AQP3Q92482 292 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 CCL13Q99616 98 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 JAM3Q9BX67 310 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 RASSF4Q9H2L5 321 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 SNTG1Q9NSN8 517 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 CHCHD3Q9NX63 227 aaKnown RBP17.24■□□□□ 0.35
VARS-218ENST00000459667 FRRS1LQ9P0K9 344 aa17.24■□□□□ 0.35
VARS-218ENST00000459667 KIR2DS1A0A191URI9 304 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 PQLC2LA1A4F0 135 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 C22orf46C9J442 243 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 DVL1O14640 695 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 TCF21O43680 179 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 ENSAO43768 121 aaKnown RBP17.23■□□□□ 0.35
VARS-218ENST00000459667 ATP6V1G2O95670 118 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 GLRA1P23415 457 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 HAAOP46952 286 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 CCR9P51686 369 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 TMEM244Q5VVB8 128 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 CD276Q5ZPR3 534 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 STUMQ69YW2 141 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 SLC36A1Q7Z2H8 476 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 ZNF573Q86YE8 665 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 OR5T2Q8NGG2 359 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 CHST5Q9GZS9 411 aa17.23■□□□□ 0.35
VARS-218ENST00000459667 ISG20L2Q9H9L3 353 aaKnown RBP17.23■□□□□ 0.35
VARS-218ENST00000459667 EXOSC1Q9Y3B2 195 aaKnown RBP17.23■□□□□ 0.35
VARS-218ENST00000459667 A0A1B0GW55 424 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 EFCAB10A6NFE3 127 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 RNF212BA8MTL3 300 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 RPSAP08865 295 aaKnown RBP17.22■□□□□ 0.35
VARS-218ENST00000459667 DUX4L2P0CJ85 424 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 DUX4L3P0CJ86 424 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 DUX4L4P0CJ87 422 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 DUX4L5P0CJ88 424 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 DUX4L6P0CJ89 424 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 DUX4L7P0CJ90 424 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 HSPA13P48723 471 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 GBX2P52951 348 aaPredicted RBP17.22■□□□□ 0.35
VARS-218ENST00000459667 SRSF2Q01130 221 aaKnown RBP17.22■□□□□ 0.35
VARS-218ENST00000459667 DUX4L9Q6RFH8 374 aaPredicted RBP17.22■□□□□ 0.35
VARS-218ENST00000459667 TMPRSS11AQ6ZMR5 421 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 FAM216BQ8N7L0 139 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 TRMT10AQ8TBZ6 339 aaKnown RBP17.22■□□□□ 0.35
VARS-218ENST00000459667 TMEM158Q8WZ71 300 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 ST8SIA4Q92187 359 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 C10orf35Q96D05 121 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 TMEM80Q96HE8 168 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 ZNF649Q9BS31 505 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 NLKQ9UBE8 527 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 DUX4Q9UBX2 424 aa17.22■□□□□ 0.35
VARS-218ENST00000459667 DIMT1Q9UNQ2 313 aaKnown RBP17.22■□□□□ 0.35
VARS-218ENST00000459667 NKX6-3A6NJ46 265 aa17.21■□□□□ 0.35
VARS-218ENST00000459667 J3QT63 122 aa17.21■□□□□ 0.35
VARS-218ENST00000459667 FCN3O75636 299 aa17.21■□□□□ 0.35
VARS-218ENST00000459667 GATBO75879 557 aaKnown RBP17.21■□□□□ 0.35
VARS-218ENST00000459667 ISG15P05161 165 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms