RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CTSCP53634 463 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 TAS2R31P59538 309 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 PAFAH1B2P68402 229 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 HBA1P69905 142 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 ARG2P78540 354 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 ZNF74Q16587 644 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CCL15Q16663 113 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 HIST3H3Q16695 136 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CT45A2Q5DJT8 189 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 AKR1C8PQ5T2L2 129 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 GRHL2Q6ISB3 625 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CDC42EP5Q6NZY7 148 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 ZNF517Q6ZMY9 492 aaPredicted RBP4.66□□□□□ -1.66
VPS41-209ENST00000457055 FRRS1Q6ZNA5 592 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CLNKQ7Z7G1 428 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 AMIGO2Q86SJ2 522 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CMTM1Q8IZ96 169 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 SLC22A15Q8IZD6 547 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 ABHD12Q8N2K0 398 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CBR4Q8N4T8 237 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 KIR3DL3Q8N743 410 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 NFAM1Q8NET5 270 aaPredicted RBP4.66□□□□□ -1.66
VPS41-209ENST00000457055 SLC30A7Q8NEW0 376 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 GPR32P1Q8NGA4 272 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 OR5K1Q8NHB7 308 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 C16orf52Q8NHV5 167 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CANT1Q8WVQ1 401 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 ASB13Q8WXK3 278 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 DDB2Q92466 427 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 RSPRY1Q96DX4 576 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 PIK3IP1Q96FE7 263 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 C20orf144Q9BQM9 153 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 FAIM2Q9BWQ8 316 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 SUCNR1Q9BXA5 334 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CPVLQ9H3G5 476 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 DPAGT1Q9H3H5 408 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 LHX9Q9NQ69 397 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 GKN1Q9NS71 199 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 SLC25A37Q9NYZ2 338 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 IL17CQ9P0M4 197 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 PRODH2Q9UF12 536 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 PRO0628Q9UI54 55 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 HSPB8Q9UJY1 196 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 KCNS2Q9ULS6 477 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 AP4S1Q9Y587 144 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 ECM29Q5VYK3 1845 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 LRRC37AA6NMS7 1700 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 PTPRZ1P23471 2315 aaPredicted RBP4.66□□□□□ -1.66
VPS41-209ENST00000457055 A0A1B0GU03 582 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.65□□□□□ -1.67
VPS41-209ENST00000457055 ANKRD20A5PA0PJZ0 165 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 MAP1LC3B2A6NCE7 125 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 CLDN25C9JDP6 229 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 CORTO00230 105 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 COPEO14579 308 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 VCYO14598 125 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 DVL1O14640 695 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 HMGB3O15347 200 aaKnown RBP4.65□□□□□ -1.67
VPS41-209ENST00000457055 PLPP2O43688 288 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 GNG7O60262 68 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 ATP6AP2O75787 350 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 PAEPP09466 180 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 MPC1LP0DKB6 136 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 SULT1A3P0DMM9 295 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 SULT1A4P0DMN0 295 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 IL1RNP18510 177 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 MAOAP21397 527 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 IDSP22304 550 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 PCSK6P29122 969 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 RPL12P30050 165 aaKnown RBP4.65□□□□□ -1.67
VPS41-209ENST00000457055 RPL21P46778 160 aaKnown RBP4.65□□□□□ -1.67
VPS41-209ENST00000457055 DVL1P1P54792 670 aaPredicted RBP4.65□□□□□ -1.67
VPS41-209ENST00000457055 FOXG1P55316 489 aaPredicted RBP4.65□□□□□ -1.67
VPS41-209ENST00000457055 KRTAP10-9P60411 292 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 INCA1Q0VD86 236 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 TCP10Q12799 353 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 KLRB1Q12918 225 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 PLA2G7Q13093 441 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 SLC10A1Q14973 349 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 SPHARQ15513 63 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 C3AR1Q16581 482 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 LRRC26Q2I0M4 334 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 LRRC75BQ2VPJ9 315 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 ACSF3Q4G176 576 aaPredicted RBP4.65□□□□□ -1.67
VPS41-209ENST00000457055 DMRTC1Q5HYR2 192 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 TMEM69Q5SWH9 247 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 COL5A1-AS1Q5SY13 56 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 C1orf220Q5T0J3 134 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 TMEM78Q5T7P6 136 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 LAMTOR1Q6IAA8 161 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 OR4A47Q6IF82 309 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 TRIM40Q6P9F5 258 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 PAQR6Q6TCH4 344 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 NAPRTQ6XQN6 538 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 ZNF620Q6ZNG0 422 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 Q6ZSR3 168 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 LANCL3Q6ZV70 420 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 SHFQ7M4L6 423 aa4.65□□□□□ -1.67
VPS41-209ENST00000457055 HSD17B13Q7Z5P4 300 aaPredicted RBP4.65□□□□□ -1.67
VPS41-209ENST00000457055 SLC35F2Q8IXU6 374 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms