RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 NCKAP5O14513 1909 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 CCDC187A0A096LP49 1063 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 ABCD4O14678 606 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 SYNGR3O43761 229 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 CST2P09228 141 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 ATXN7L3Q14CW9 347 aaPredicted RBP16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 TIPARPQ7Z3E1 657 aaKnown RBP16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 PEG10Q86TG7 708 aaKnown RBP16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 CT55Q8WUE5 264 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 ADGRG7Q96K78 797 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 SGCEO43556 437 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 BLVRBP30043 206 aaPredicted RBP16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 DLSTP36957 453 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 NPY4RP50391 375 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 FLI1Q01543 452 aaPredicted RBP16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 TMEM128Q5BJH2 165 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 TCEAL6Q6IPX3 200 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 DRAM2Q6UX65 266 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 C6orf15Q6UXA7 325 aaPredicted RBP16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 ACOT7LQ6ZUV0 252 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 CCDC36Q8IYA8 594 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 BOLLQ8N9W6 283 aaKnown RBP16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 TCEAL3Q969E4 200 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 PIGTQ969N2 578 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 SAV1Q9H4B6 383 aaPredicted RBP16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 TMEM38BQ9NVV0 291 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 PRELID3BQ9Y3B1 194 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 PCSK5Q92824 1860 aa16.05■□□□□ 0.16
SEMA3B-209ENST00000456560 FAM25EA8MYX2 175 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 CA11O75493 328 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 HPNP05981 417 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 AMY2BP19961 511 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 TCN2P20062 427 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 SERPINA2P20848 420 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 SSPNQ14714 243 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 KRTAP27-1Q3LI81 207 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 ZNF528Q3MIS6 628 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 PABPC1L2AQ5JQF8 200 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 ACER2Q5QJU3 275 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 OR13G1Q8NGZ3 307 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 CPT1CQ8TCG5 803 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 OSGIN2Q9Y236 505 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 LOXL2Q9Y4K0 774 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 DHRS7CA6NNS2 312 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 CXCL13O43927 109 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 SFT2D2O95562 160 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 FPR2P25090 351 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 ABLIM2Q6H8Q1 611 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 DBX2Q6ZNG2 339 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 ROBO4Q8WZ75 1007 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 SLC39A7Q92504 469 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 ST6GALNAC5Q9BVH7 336 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 CRLF2Q9HC73 371 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 DEPPQ9NTK1 212 aa16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 MRPS18CQ9Y3D5 142 aaKnown RBP16.04■□□□□ 0.16
SEMA3B-209ENST00000456560 SERPINE3A8MV23 424 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 SERPINA7P05543 415 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 ACKR3P25106 362 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 SERPINF1P36955 418 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 SNU13P55769 128 aaKnown RBP16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 CLDN15P56746 228 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 PPIAP62937 165 aaKnown RBP16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 HGFACQ04756 655 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 AADACL3Q5VUY0 350 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 ZNF774Q6NX45 483 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 AAED1Q7RTV5 226 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 SULF2Q8IWU5 870 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 SEMA6DQ8NFY4 1073 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 OR1F12Q8NHA8 337 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 OR2V1Q8NHB1 315 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 PHYHIPLQ96FC7 376 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 RTBDNQ9BSG5 229 aaPredicted RBP16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 PURGQ9UJV8 347 aaKnown RBP16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 RTTNQ86VV8 2226 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 CACNA1HO95180 2353 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 A0A0B4J2A0 478 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 PMS2P1A4D2B8 440 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 EEF1E1-BLOC1S5C9J1V9 151 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 CRHP06850 196 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 TAS2R46P59540 309 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 SNTB1Q13884 538 aaKnown RBP16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 WIPI1Q5MNZ9 446 aaPredicted RBP16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 SCGB3A2Q96PL1 93 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 S100A13Q99584 98 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 ARRDC1-AS1Q9H2J1 176 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 PIGMQ9H3S5 423 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 GPR173Q9NS66 373 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 SHPKQ9UHJ6 478 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 ZNF175Q9Y473 711 aa16.03■□□□□ 0.16
SEMA3B-209ENST00000456560 OR6C6A6NF89 314 aa16.02■□□□□ 0.16
SEMA3B-209ENST00000456560 CPT2P23786 658 aa16.02■□□□□ 0.16
SEMA3B-209ENST00000456560 ARL6IP1Q15041 203 aa16.02■□□□□ 0.16
SEMA3B-209ENST00000456560 PPA1Q15181 289 aa16.02■□□□□ 0.16
SEMA3B-209ENST00000456560 PAN3Q58A45 887 aaKnown RBP16.02■□□□□ 0.16
SEMA3B-209ENST00000456560 NSUN5P2Q63ZY6 315 aa16.02■□□□□ 0.16
SEMA3B-209ENST00000456560 OR10D3Q8NH80 312 aa16.02■□□□□ 0.16
SEMA3B-209ENST00000456560 OR2AE1Q8NHA4 323 aa16.02■□□□□ 0.16
SEMA3B-209ENST00000456560 THAP6Q8TBB0 222 aa16.02■□□□□ 0.16
SEMA3B-209ENST00000456560 NMES1Q9C002 83 aa16.02■□□□□ 0.16
SEMA3B-209ENST00000456560 OR3A2P47893 321 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms