RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 CT45A6P0DMU7 189 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CT45A5P0DMU8 189 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CT45A7P0DMV0 189 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 UBE2G2P60604 165 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 UBE2G1P62253 170 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 TIAL1Q01085 375 aaKnown RBP eCLIP4.48□□□□□ -1.69
PCDH9-203ENST00000456367 SMAD2Q15796 467 aaKnown RBP4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CT45A1Q5HYN5 189 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 FAM78BQ5VT40 261 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 UNQ9370/PRO34162Q6UXP9 181 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 OLIG3Q7RTU3 272 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 MRGPREQ86SM8 312 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 OR5D18Q8NGL1 313 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 OR10G8Q8NGN5 311 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CT45A3Q8NHU0 189 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 REEP6Q96HR9 211 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 NUDT22Q9BRQ3 303 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 WNK3Q9BYP7 1800 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 SLC26A1Q9H2B4 701 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CLEC18AA5D8T8 446 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 TNFRSF10CO14798 259 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 TGM5O43548 720 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CTSVO60911 334 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 WDR1O75083 606 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 KLKB1P03952 638 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 ZNF865P0CJ78 1059 aaPredicted RBP4.48□□□□□ -1.69
PCDH9-203ENST00000456367 ST6GAL1P15907 406 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 HLA-GP17693 338 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 BRS3P32247 399 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 APLNRP35414 380 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 ASCL1P50553 236 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CLN3Q13286 438 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 GAMTQ14353 236 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CLLU1OSQ5K130 101 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 DHRS11Q6UWP2 260 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 PLXDC1Q8IUK5 500 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CLEC18CQ8NCF0 446 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 DMBX1Q8NFW5 382 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 NT5CQ8TCD5 201 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CCDC74BQ96LY2 380 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 LRFN3Q9BTN0 628 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 ALKBH4Q9NXW9 302 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 FUT9Q9Y231 359 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 GOLGA4Q13439 2230 aaKnown RBP4.48□□□□□ -1.69
PCDH9-203ENST00000456367 A0A1W2PNV4 684 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 OR4C45A6NMZ5 311 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 H3BML4 177 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 DUX1O43812 170 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 NKX2-2O95096 273 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 F12P00748 615 aaPredicted RBP4.48□□□□□ -1.69
PCDH9-203ENST00000456367 TTRP02766 147 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 JMJD7P0C870 316 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 RNF224P0DH78 156 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CD22P20273 847 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 GLRA1P23415 457 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 SUB1P53999 127 aaKnown RBP eCLIP4.48□□□□□ -1.69
PCDH9-203ENST00000456367 HHEXQ03014 270 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 NUFIP2Q7Z417 695 aaKnown RBP4.48□□□□□ -1.69
PCDH9-203ENST00000456367 KLHDC9Q8NEP7 349 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 OR10AD1Q8NGE0 317 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 FAM174AQ8TBP5 190 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 ASB5Q8WWX0 329 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 FOXN4Q96NZ1 517 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 GPR84Q9NQS5 396 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 WIPI2Q9Y4P8 454 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 LRP12Q9Y561 859 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CITO14578 2027 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 DIRC3C9JPN6 131 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 MASP2O00187 686 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 HSD17B6O14756 317 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CST7O76096 145 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 BCL2P10415 239 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 ZNF17P17021 662 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 FSTP19883 344 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 GALNSP34059 522 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 PTGER4P35408 488 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 HTR5AP47898 357 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 SUMO3P55854 103 aaPredicted RBP4.48□□□□□ -1.69
PCDH9-203ENST00000456367 H2BFSP57053 126 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 ZP1P60852 638 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 EFNB1P98172 346 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 OR8B8Q15620 311 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 ANKRD39Q53RE8 183 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 ZNF468Q5VIY5 522 aaPredicted RBP4.48□□□□□ -1.69
PCDH9-203ENST00000456367 OR4A47Q6IF82 309 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 KIRREL2Q6UWL6 708 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 TGIF2LYQ8IUE0 185 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 OR4N2Q8NGD1 307 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 OR4A4PQ8NGN8 299 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 PTPMT1Q8WUK0 201 aaPredicted RBP4.48□□□□□ -1.69
PCDH9-203ENST00000456367 PIGTQ969N2 578 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 C10orf35Q96D05 121 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 TAAR6Q96RI8 345 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 COL25A1Q9BXS0 654 aaPredicted RBP4.48□□□□□ -1.69
PCDH9-203ENST00000456367 WDR13Q9H1Z4 485 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 HEXA-AS1Q9H8Q6 139 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 CDH20Q9HBT6 801 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 LRIT1Q9P2V4 623 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 B3GAT1Q9P2W7 334 aa4.48□□□□□ -1.69
PCDH9-203ENST00000456367 SCN9AQ15858 1988 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms