RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 KISS1Q15726 138 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 IDNKQ5T6J7 187 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 HIST2H2BCQ6DN03 193 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 UNQ6126/PRO20091Q6UXV3 157 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 BIVMQ86UB2 503 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 ZDHHC23Q8IYP9 409 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 BATF2Q8N1L9 274 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 JAGN1Q8N5M9 183 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 RNF170Q96K19 258 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 CEP19Q96LK0 163 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 WDR12Q9GZL7 423 aaKnown RBP9.33□□□□□ -0.92
SCN9A-205ENST00000454569 AKIP1Q9NQ31 210 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 TUBG2Q9NRH3 451 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 MRPL15Q9P015 296 aaKnown RBP9.33□□□□□ -0.92
SCN9A-205ENST00000454569 CKLFQ9UBR5 152 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 TANC2Q9HCD6 1990 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 SPG11Q96JI7 2443 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 IGKV1-12A0A0C4DH73 117 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 A0A1B0GWJ7 208 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 PQLC2LA1A4F0 135 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 FAM221AA4D161 298 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 ANXA2P2A6NMY6 339 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 NOTOA8MTQ0 251 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 ZNF732B4DXR9 585 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 SPRY1O43609 319 aaPredicted RBP9.33□□□□□ -0.92
SCN9A-205ENST00000454569 PLATP00750 562 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 IGKV1D-12P01611 117 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 CD8AP01732 235 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 ALDOBP05062 364 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 BMP4P12644 408 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 APOBEC3AP31941 199 aaPredicted RBP9.33□□□□□ -0.92
SCN9A-205ENST00000454569 ZNF93P35789 620 aaPredicted RBP9.33□□□□□ -0.92
SCN9A-205ENST00000454569 SERPINF1P36955 418 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 ZP1P60852 638 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 RPS23P62266 143 aaKnown RBP9.33□□□□□ -0.92
SCN9A-205ENST00000454569 PPP3R1P63098 170 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 CEACAM21Q3KPI0 293 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 C1orf100Q5SVJ3 147 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 OR10K2Q6IF99 312 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 CROCCP3Q8IVE0 287 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 C11orf53Q8IXP5 236 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 C1orf174Q8IYL3 243 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 C1orf147Q96MC9 270 aaPredicted RBP9.33□□□□□ -0.92
SCN9A-205ENST00000454569 ADAT1Q9BUB4 502 aaKnown RBP9.33□□□□□ -0.92
SCN9A-205ENST00000454569 SLITRK2Q9H156 845 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 PLK3Q9H4B4 646 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 TMEM100Q9NV29 134 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 MPC1Q9Y5U8 109 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 A0A1W2PP11 408 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 F8VVB4 439 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 F8VWA3 439 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 PDCD5O14737 125 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 SPRY3O43610 288 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 ANGPTL7O43827 346 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 SOD3P08294 240 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 EFNB2P52799 333 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 MTCP1P56278 107 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 DCTN2Q13561 401 aaKnown RBP9.32□□□□□ -0.92
SCN9A-205ENST00000454569 OR8G1Q15617 311 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 MPPED2Q15777 294 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 PRAMEF6Q5VXH4 476 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 ZNF826PQ6ZT77 177 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 TGIF2LYQ8IUE0 185 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 OR2Z1Q8NG97 314 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 OR51D1Q8NGF3 324 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 BORCS5Q969J3 196 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 DHRS9Q9BPW9 319 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 SPOCK3Q9BQ16 436 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 MIXL1Q9H2W2 232 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 METTL17Q9H7H0 456 aaPredicted RBP9.32□□□□□ -0.92
SCN9A-205ENST00000454569 PLGRKTQ9HBL7 147 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 OR5V1Q9UGF6 321 aa9.32□□□□□ -0.92
SCN9A-205ENST00000454569 PTPN13Q12923 2485 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 AIPO00170 330 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 SLC17A2O00624 439 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 SYNGR1O43759 233 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 RHBDL1O75783 438 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 IGHV1-46P01743 117 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 DANCRP0C864 163 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 CALCBP10092 127 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 HTR2CP28335 458 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 PMELP40967 661 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 FUT6P51993 359 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 MADCAM1Q13477 382 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 CNN3Q15417 329 aaKnown RBP9.31□□□□□ -0.92
SCN9A-205ENST00000454569 C2orf76Q3KRA6 126 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 SPANXN2Q5MJ10 180 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 GLT8D1Q68CQ7 371 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 MZT2AQ6P582 158 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 LAX1Q8IWV1 398 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 DTX3Q8N9I9 347 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 OR5A2Q8NGI9 324 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 OR10K1Q8NGX5 313 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 BORCS8Q96FH0 119 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 ZNF488Q96MN9 340 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 OR51I2Q9H344 312 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 LIN7BQ9HAP6 207 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 COMMD3Q9UBI1 195 aa9.31□□□□□ -0.92
SCN9A-205ENST00000454569 MEGF11A6BM72 1044 aa9.3□□□□□ -0.92
SCN9A-205ENST00000454569 HPGDSO60760 199 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms