RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 MED30Q96HR3 178 aa9.93□□□□□ -0.82
USP40-210ENST00000454354 RIBC2Q9H4K1 309 aa9.93□□□□□ -0.82
USP40-210ENST00000454354 CNTD2Q9H8S5 307 aa9.93□□□□□ -0.82
USP40-210ENST00000454354 NLKQ9UBE8 527 aa9.93□□□□□ -0.82
USP40-210ENST00000454354 ZNF222Q9UK12 451 aa9.93□□□□□ -0.82
USP40-210ENST00000454354 OR52A1Q9UKL2 312 aa9.93□□□□□ -0.82
USP40-210ENST00000454354 SNX5Q9Y5X3 404 aa9.93□□□□□ -0.82
USP40-210ENST00000454354 IGHV1-69DA0A0B4J2H0 117 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 A0A1B0GVI7 797 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 SAC3D1A6NKF1 404 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 OR2AT4A6NND4 320 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 E9PQ18 207 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 HOXA3O43365 443 aaPredicted RBP9.92□□□□□ -0.82
USP40-210ENST00000454354 NRASP01111 189 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 IGHV1-69P01742 117 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 ALPLP05186 524 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 KRT8P05787 483 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 ACAA1P09110 424 aaPredicted RBP9.92□□□□□ -0.82
USP40-210ENST00000454354 OR2T7P0C7T2 308 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 SELLP14151 372 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 GLRA1P23415 457 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 CAV3P56539 151 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 GMFBP60983 142 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 IL13RA1P78552 427 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 IKZF1Q13422 519 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 DGUOKQ16854 277 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 CLVS2Q5SYC1 327 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 PLCXD3Q63HM9 321 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 METAP1DQ6UB28 335 aaPredicted RBP9.92□□□□□ -0.82
USP40-210ENST00000454354 PLEKHG7Q6ZR37 379 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 MOB3CQ70IA8 216 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 VMO1Q7Z5L0 202 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 TMEM86BQ8N661 226 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 OR14K1Q8NGZ2 314 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 OR2T27Q8NH04 317 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 PYDC1Q8WXC3 89 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 LHX4Q969G2 390 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 SNTG1Q9NSN8 517 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 RASL12Q9NYN1 266 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 USE1Q9NZ43 259 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 POMT1Q9Y6A1 747 aa9.92□□□□□ -0.82
USP40-210ENST00000454354 IGKV1D-17A0A075B6S4 117 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 A0A1W2PQL4 384 aaPredicted RBP9.91□□□□□ -0.82
USP40-210ENST00000454354 PQLC2LA1A4F0 135 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 H3BNX3 289 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 DLGAP1O14490 977 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 NOS1APO75052 506 aaPredicted RBP9.91□□□□□ -0.82
USP40-210ENST00000454354 SULT1C4O75897 302 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 MELTFP08582 738 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 PSG2P11465 335 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 MPZP25189 248 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 CDC42P60953 191 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 ISL1P61371 349 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 SLC25A30Q5SVS4 291 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 ZFP1Q6P2D0 407 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 C16orf87Q6PH81 154 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 HAGHLQ6PII5 290 aaPredicted RBP9.91□□□□□ -0.82
USP40-210ENST00000454354 CATSPERDQ86XM0 798 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 CMTM4Q8IZR5 234 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 YIPF7Q8N8F6 280 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 POC1AQ8NBT0 407 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 ZNF671Q8TAW3 534 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 TRUB1Q8WWH5 349 aaKnown RBP9.91□□□□□ -0.82
USP40-210ENST00000454354 RFKQ969G6 155 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 EME1Q96AY2 570 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 TMIGD2Q96BF3 282 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 SDSLQ96GA7 329 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 HRASLS5Q96KN8 279 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 TBX5Q99593 518 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 ZNF747Q9BV97 191 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 ACOXLQ9NUZ1 547 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 SLC25A10Q9UBX3 287 aaPredicted RBP9.91□□□□□ -0.82
USP40-210ENST00000454354 GTF2A1LQ9UNN4 478 aa9.91□□□□□ -0.82
USP40-210ENST00000454354 MEGF8Q7Z7M0 2845 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 METTL15A6NJ78 407 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 J3QT63 122 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 TFF1P04155 84 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 PGA5P0DJD9 388 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 ALDH3A2P51648 485 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 KPNB1Q14974 876 aaKnown RBP9.9□□□□□ -0.82
USP40-210ENST00000454354 SMIM21Q3B7S5 101 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 DMRTC1Q5HYR2 192 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 ACP7Q6ZNF0 438 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 C1orf122Q6ZSJ8 110 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 LDLRAD3Q86YD5 345 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 ZNF573Q86YE8 665 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 Q8N7P7 452 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 CCDC54Q8NEL0 328 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 SGMS2Q8NHU3 365 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 NPRL2Q8WTW4 380 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 RORBQ92753 470 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 ZDHHC16Q969W1 377 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 UNKLQ9H9P5 680 aaKnown RBP9.9□□□□□ -0.82
USP40-210ENST00000454354 GPR173Q9NS66 373 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 ONECUT1Q9UBC0 465 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.9□□□□□ -0.82
USP40-210ENST00000454354 SLC22A13Q9Y226 551 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 MAB21L2Q9Y586 359 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 PCDHGB1Q9Y5G3 927 aa9.9□□□□□ -0.82
USP40-210ENST00000454354 MMP24Q9Y5R2 645 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms