RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 EGR1P18146 543 aa23.43■■□□□ 1.34
SMARCC1-203ENST00000454240 CD80P33681 288 aa23.43■■□□□ 1.34
SMARCC1-203ENST00000454240 TAS2R43P59537 309 aa23.43■■□□□ 1.34
SMARCC1-203ENST00000454240 BOLLQ8N9W6 283 aaKnown RBP23.43■■□□□ 1.34
SMARCC1-203ENST00000454240 MND1Q9BWT6 205 aa23.43■■□□□ 1.34
SMARCC1-203ENST00000454240 PCDHB10Q9UN67 800 aa23.43■■□□□ 1.34
SMARCC1-203ENST00000454240 SLC7A11Q9UPY5 501 aa23.43■■□□□ 1.34
SMARCC1-203ENST00000454240 CEACAM18A8MTB9 384 aa23.42■■□□□ 1.34
SMARCC1-203ENST00000454240 SRRM5B3KS81 715 aa23.42■■□□□ 1.34
SMARCC1-203ENST00000454240 F5H0A9 414 aaPredicted RBP23.42■■□□□ 1.34
SMARCC1-203ENST00000454240 RGS10O43665 173 aa23.42■■□□□ 1.34
SMARCC1-203ENST00000454240 TEX36Q5VZQ5 186 aa23.42■■□□□ 1.34
SMARCC1-203ENST00000454240 SFRP4Q6FHJ7 346 aaPredicted RBP23.42■■□□□ 1.34
SMARCC1-203ENST00000454240 ZNF573Q86YE8 665 aa23.42■■□□□ 1.34
SMARCC1-203ENST00000454240 DEFB108BQ8NET1 73 aa23.42■■□□□ 1.34
SMARCC1-203ENST00000454240 AQP3Q92482 292 aa23.42■■□□□ 1.34
SMARCC1-203ENST00000454240 ZNF281Q9Y2X9 895 aa23.42■■□□□ 1.34
SMARCC1-203ENST00000454240 LSM2Q9Y333 95 aaKnown RBP23.42■■□□□ 1.34
SMARCC1-203ENST00000454240 MTORP42345 2549 aa23.42■■□□□ 1.34
SMARCC1-203ENST00000454240 DOCK11Q5JSL3 2073 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 IGKV1-9A0A0C4DH69 117 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 OOEPA6NGQ2 149 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 C3orf80F5H4A9 247 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 RHBDL1O75783 438 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 TGFAP01135 160 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 CPT2P23786 658 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 FUT6P51993 359 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 ACSM1Q08AH1 577 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 HAGHLQ6PII5 290 aaPredicted RBP23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 PARP16Q8N5Y8 322 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 ZFP41Q8N8Y5 198 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 TRMT10AQ8TBZ6 339 aaKnown RBP23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 GPR148Q8TDV2 347 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 GHSRQ92847 366 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 PGLYRP3Q96LB9 341 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 DHDHQ9UQ10 334 aa23.41■■□□□ 1.34
SMARCC1-203ENST00000454240 TRAV38-1A0A0B4J264 116 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 TNFRSF13BO14836 293 aaPredicted RBP23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 PLPP2O43688 288 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 MT-ND2P03891 347 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 WNT2P09544 360 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 ATF1P18846 271 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 HAAOP46952 286 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 BDH1Q02338 343 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 CNN3Q15417 329 aaKnown RBP23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 KCNJ8Q15842 424 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 DCDC5Q6ZRR9 648 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 PRSS48Q7RTY5 328 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 DNAAF1Q8NEP3 725 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 ZNF671Q8TAW3 534 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 NPRL2Q8WTW4 380 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 YAE1D1Q9NRH1 226 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 MIOXQ9UGB7 285 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 BLOC1S6Q9UL45 172 aa23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 ANK3Q12955 4377 aaKnown RBP23.4■■□□□ 1.34
SMARCC1-203ENST00000454240 FAM230AA0A1W2PPH8 454 aa23.39■■□□□ 1.33
SMARCC1-203ENST00000454240 CD1AP06126 327 aa23.39■■□□□ 1.33
SMARCC1-203ENST00000454240 FAM166AQ6J272 317 aa23.39■■□□□ 1.33
SMARCC1-203ENST00000454240 SERPINA12Q8IW75 414 aa23.39■■□□□ 1.33
SMARCC1-203ENST00000454240 TSEN15Q8WW01 171 aaKnown RBP23.39■■□□□ 1.33
SMARCC1-203ENST00000454240 OR5M11Q96RB7 305 aa23.39■■□□□ 1.33
SMARCC1-203ENST00000454240 ZCCHC4Q9H5U6 513 aa23.39■■□□□ 1.33
SMARCC1-203ENST00000454240 HIVEP2P31629 2446 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 ARHGAP32A7KAX9 2087 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 IGKV1-27A0A075B6S5 117 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 A8MV72 311 aaPredicted RBP23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 J3QT63 122 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 AKR7A2O43488 359 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 MSMBP08118 114 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 MUC1P15941 1255 aaPredicted RBP23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 MPZP25189 248 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 SPHARQ15513 63 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 LYPD2Q6UXB3 125 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 FAM90A1Q86YD7 464 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 CALHM1Q8IU99 346 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 OR5D14Q8NGL3 314 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 OR51F2Q8NH61 342 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 SPSB1Q96BD6 273 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 BORCS8Q96FH0 119 aa23.38■■□□□ 1.33
SMARCC1-203ENST00000454240 NDUFA2O43678 99 aa23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 ALX3O95076 343 aa23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 RPS2P15880 293 aaKnown RBP23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 CELP19835 753 aa23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 PRKACBP22694 351 aa23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 AZGP1P25311 298 aaKnown RBP23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 DVL1P1P54792 670 aaPredicted RBP23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 SEC61A1P61619 476 aaKnown RBP23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 RPS11P62280 158 aaKnown RBP eCLIP23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 MICBQ29980 383 aa23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 YIF1BQ5BJH7 314 aa23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 ANGPTL5Q86XS5 388 aa23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 SEH1LQ96EE3 360 aa23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 PKIBQ9C010 78 aa23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 CCDC90BQ9GZT6 254 aa23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 WDR13Q9H1Z4 485 aa23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 LPAR2Q9HBW0 351 aa23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 NSD1Q96L73 2696 aaPredicted RBP23.37■■□□□ 1.33
SMARCC1-203ENST00000454240 IGHV3OR15-7A0A075B7D8 119 aa23.36■■□□□ 1.33
SMARCC1-203ENST00000454240 TRBV5-5A0A0J9YX44 114 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms