RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 GTF2A1P52655 376 aaPredicted RBP7.35□□□□□ -1.23
COL28A1-205ENST00000453441 GP2P55259 537 aaKnown RBP7.35□□□□□ -1.23
COL28A1-205ENST00000453441 MAB21L1Q13394 359 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 TPBGQ13641 420 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 CARTPTQ16568 116 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 Q499Y3 187 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 MOB3CQ70IA8 216 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 MUC20Q8N307 709 aaPredicted RBP7.35□□□□□ -1.23
COL28A1-205ENST00000453441 OR1M1Q8NGA1 313 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 HPSE2Q8WWQ2 592 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 PHYHIPQ92561 330 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 CCL17Q92583 94 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 GHSRQ92847 366 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 YIPF5Q969M3 257 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 PGLYRP3Q96LB9 341 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 NR1H4Q96RI1 486 aaPredicted RBP7.35□□□□□ -1.23
COL28A1-205ENST00000453441 MGLLQ99685 303 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 PDCD1LG2Q9BQ51 273 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 SOX7Q9BT81 388 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 ZCCHC4Q9H5U6 513 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 ACOT13Q9NPJ3 140 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 RNF7Q9UBF6 113 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 CKLFQ9UBR5 152 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 NPTNQ9Y639 398 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 OTOGQ6ZRI0 2925 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 A0A087WXM4 84 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 TRBV5-5A0A0J9YX44 114 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 PQLC2LA1A4F0 135 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 TRIM64BA6NI03 449 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 A6NLC8 198 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF732B4DXR9 585 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 TMEM178BH3BS89 294 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 J3QT63 122 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 MAGEB3O15480 346 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 PPIHO43447 177 aaKnown RBP7.34□□□□□ -1.23
COL28A1-205ENST00000453441 NDUFA2O43678 99 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 CDC14BO60729 498 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 GPX5O75715 221 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 LY6HO94772 140 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 ACAA1P09110 424 aaPredicted RBP7.34□□□□□ -1.23
COL28A1-205ENST00000453441 CPEP16870 476 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 ATF1P18846 271 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 USF1P22415 310 aaPredicted RBP7.34□□□□□ -1.23
COL28A1-205ENST00000453441 COL8A2P25067 703 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 RANBP1P43487 201 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 RBP2P50120 134 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 PPP3R1P63098 170 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 LOXL1Q08397 574 aaPredicted RBP7.34□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF154Q13106 437 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 TMEM155Q4W5P6 130 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 UBE2UQ5VVX9 321 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 XAF1Q6GPH4 301 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 LHFPL2Q6ZUX7 228 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 KCTD8Q6ZWB6 473 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 MOGAT3Q86VF5 341 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 RDH10Q8IZV5 341 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 SPARTQ8N0X7 666 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 SPICQ8N5J4 248 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 WFDC11Q8NEX6 87 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF671Q8TAW3 534 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 TMEM106AQ96A25 262 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 FGGYQ96C11 551 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 BORCS8Q96FH0 119 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 OR5M11Q96RB7 305 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 REG4Q9BYZ8 158 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 PKIBQ9C010 78 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 OR51I2Q9H344 312 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF696Q9H7X3 374 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 RHOFQ9HBH0 211 aa7.34□□□□□ -1.23
COL28A1-205ENST00000453441 FLNAP21333 2647 aaKnown RBP7.34□□□□□ -1.23
COL28A1-205ENST00000453441 PPIAL4EA0A075B759 164 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 IGHV4-30-2A0A087WSY4 118 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 CYSRT1A8MQ03 144 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 ZNF879B4DU55 563 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 PPIAL4DF5H284 164 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 SULT1B1O43704 296 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 CYB5AP00167 134 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 ALDOBP05062 364 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 GRPP07492 148 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 PPIAL4FP0DN26 164 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 MUC1P15941 1255 aaPredicted RBP7.33□□□□□ -1.24
COL28A1-205ENST00000453441 RAB3AP20336 220 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 GALP22466 123 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 MPZP25189 248 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 AZGP1P25311 298 aaKnown RBP7.33□□□□□ -1.24
COL28A1-205ENST00000453441 GABRA5P31644 462 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 THBS2P35442 1172 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 MDH2P40926 338 aaKnown RBP7.33□□□□□ -1.24
COL28A1-205ENST00000453441 ATP1B3P54709 279 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 BTG1P62324 171 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 EMX1Q04741 257 aaPredicted RBP7.33□□□□□ -1.24
COL28A1-205ENST00000453441 IL24Q13007 206 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 CEP78Q5JTW2 689 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 PRAMEF6Q5VXH4 476 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 WDR86Q86TI4 376 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 FAM90A1Q86YD7 464 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 CDH26Q8IXH8 852 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 OR51A4Q8NGJ6 313 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 OR10AC1Q8NH08 325 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 RGP1Q92546 391 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms