RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 ALG8Q9BVK2 526 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 JAM3Q9BX67 310 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 ZNF665Q9H7R5 613 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 TRIM36Q9NQ86 728 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 ACOXLQ9NUZ1 547 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 C1orf123Q9NWV4 160 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 ERVK13-1Q9NX77 482 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 KCNS2Q9ULS6 477 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 PIGLQ9Y2B2 252 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 EXOSC1Q9Y3B2 195 aaKnown RBP7.48□□□□□ -1.21
COL8A1-203ENST00000452013 V9GYS6 101 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 ANKRD17O75179 2603 aaKnown RBP7.48□□□□□ -1.21
COL8A1-203ENST00000452013 hCG_1807616A0A1W2PRN6 198 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 WNT9BO14905 357 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 NDUFA2O43678 99 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 LMX1BO60663 402 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 UPK1BO75841 260 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 NRASP01111 189 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 IGHV2-70P01814 119 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 APOA1P02647 267 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 ISG15P05161 165 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 CCL1P22362 96 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 MAP2K4P45985 399 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 VBP1P61758 197 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 GNG3P63215 75 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 KRTAP1-1Q07627 177 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 ST3GAL4Q11206 333 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 ALKBH1Q13686 389 aaKnown RBP7.47□□□□□ -1.21
COL8A1-203ENST00000452013 ARMCX4Q5H9R4 360 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 FAM76BQ5HYJ3 339 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 WDR38Q5JTN6 314 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 CLVS2Q5SYC1 327 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 PRSS35Q8N3Z0 413 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 OR1M1Q8NGA1 313 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 OR2G2Q8NGZ5 317 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 OR51F2Q8NH61 342 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 ZNF671Q8TAW3 534 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 SGCDQ92629 289 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 C10orf35Q96D05 121 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 MND1Q9BWT6 205 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 PLEKHA1Q9HB21 404 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 PATZ1Q9HBE1 687 aaKnown RBP7.47□□□□□ -1.21
COL8A1-203ENST00000452013 TMEM165Q9HC07 324 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 DCAF16Q9NXF7 216 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 FRRS1LQ9P0K9 344 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 MIOXQ9UGB7 285 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 STUB1Q9UNE7 303 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 DIMT1Q9UNQ2 313 aaKnown RBP7.47□□□□□ -1.21
COL8A1-203ENST00000452013 SLC7A11Q9UPY5 501 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 CAB39Q9Y376 341 aaPredicted RBP7.47□□□□□ -1.21
COL8A1-203ENST00000452013 CADP27708 2225 aa7.47□□□□□ -1.21
COL8A1-203ENST00000452013 TRAV38-1A0A0B4J264 116 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 TRAV20A0A0B4J274 112 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 OR5B21A6NL26 309 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 ZNF732B4DXR9 585 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 J3QRK9 145 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 LGALS8O00214 317 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 CDIPTO14735 213 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 FOXH1O75593 365 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 IGHV2-5P01817 119 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 MSMBP08118 114 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 LIMS3P0CW19 117 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 LIMS4P0CW20 117 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 FAHP16930 419 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 PSMA1P25786 263 aaKnown RBP7.46□□□□□ -1.22
COL8A1-203ENST00000452013 IL2RGP31785 369 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 CFHR2P36980 270 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 TGM4P49221 684 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 DVL1P1P54792 670 aaPredicted RBP7.46□□□□□ -1.22
COL8A1-203ENST00000452013 NCS1P62166 190 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 MLLT11Q13015 90 aaPredicted RBP7.46□□□□□ -1.22
COL8A1-203ENST00000452013 ZMYND11Q15326 602 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 ODF4Q2M2E3 257 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 CCDC58Q4VC31 144 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 SPANXN2Q5MJ10 180 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 PLCXD3Q63HM9 321 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 RPL22L1Q6P5R6 122 aaKnown RBP7.46□□□□□ -1.22
COL8A1-203ENST00000452013 GLCCI1Q86VQ1 547 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 ZNF676Q8N7Q3 588 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 BOLLQ8N9W6 283 aaKnown RBP7.46□□□□□ -1.22
COL8A1-203ENST00000452013 OR10Z1Q8NGY1 313 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 NDNFQ8TB73 568 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 DVL3Q92997 716 aaPredicted RBP7.46□□□□□ -1.22
COL8A1-203ENST00000452013 PELI1Q96FA3 418 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 TECTBQ96PL2 329 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 MGLLQ99685 303 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 NEURL2Q9BR09 285 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 ZNF649Q9BS31 505 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 COMMD4Q9H0A8 199 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 ISG20L2Q9H9L3 353 aaKnown RBP7.46□□□□□ -1.22
COL8A1-203ENST00000452013 NEK6Q9HC98 313 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 TMEM160Q9NX00 188 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 BABAM2Q9NXR7 383 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 HHLA2Q9UM44 414 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 AKAP9Q99996 3911 aa7.46□□□□□ -1.22
COL8A1-203ENST00000452013 CCDC168Q8NDH2 2452 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 MYO9AB2RTY4 2548 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 ROS1P08922 2347 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 TRBV2A0A0J9YWF9 115 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 OOEPA6NGQ2 149 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms