RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 MR1Q95460 341 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 ANKRD9Q96BM1 317 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 SARAFQ96BY9 339 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 ARSGQ96EG1 525 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 C1orf147Q96MC9 270 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 C5orf34Q96MH7 638 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 VSTM2LQ96N03 204 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 TSSK2Q96PF2 358 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 TSPAN32Q96QS1 320 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 OR2A5Q96R48 311 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 INTS14Q96SY0 518 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 CDCA3Q99618 268 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 GINS3Q9BRX5 216 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 ZPBPQ9BS86 351 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 ULBP3Q9BZM4 244 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 RAB33BQ9H082 229 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 RGCCQ9H4X1 137 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 C11orf1Q9H5F2 150 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 XKR8Q9H6D3 395 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 MMP25Q9NPA2 562 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 G6PC2Q9NQR9 355 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 DECR2Q9NUI1 292 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 MRPL22Q9NWU5 206 aaKnown RBP3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 GAR1Q9NY12 217 aaKnown RBP3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 TAS2R4Q9NYW5 299 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 SH3BGRL2Q9UJC5 107 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 SLC22A13Q9Y226 551 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 STRAPQ9Y3F4 350 aaKnown RBP3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 CPAMD8Q8IZJ3 1885 aa3.62□□□□□ -1.83
HMGB3P22-202ENST00000451823 TET1Q8NFU7 2136 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 A0A0A6YYD4 124 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 C13orf42A0A1B0GVH6 325 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 TMEM269A0A1B0GVZ9 245 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 TLCD2A6NGC4 264 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SERINC4A6NH21 518 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 LINC00473A8K010 186 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 A8MWP6 167 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 UMAD1C9J7I0 102 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SMAD9O15198 467 aaKnown RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 TGOLN2O43493 480 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HIST1H2BKO60814 126 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 CA11O75493 328 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 DEDDO75618 318 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 PTBP3O95758 552 aaKnown RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 TIMP1P01033 207 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 IGHMP01871 453 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 BGLAPP02818 100 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 ARG1P05089 322 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HIST1H2BJP06899 126 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SOD3P08294 240 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SLC35E2P0CK97 266 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 PET100P0DJ07 73 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 PNMTP11086 282 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 DAOP14920 347 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 FOLR1P15328 257 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HIST1H2BOP23527 126 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 CRABP1P29762 137 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 CCKBRP32239 447 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HIST1H2BBP33778 126 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HRH1P35367 487 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 RPL4P36578 427 aaKnown RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 APOBEC1P41238 236 aaKnown RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 TM4SF4P48230 202 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 RND2P52198 227 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 ADPRHP54922 357 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HIST1H2BDP58876 126 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 OR2B8PP59922 312 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 CTXN1P60606 82 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 NUTF2P61970 127 aaKnown RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HIST1H2BCP62807 126 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 RAP1AP62834 184 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 BTG2P78543 158 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 IGLV3-21P80748 117 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SP3Q02447 781 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 MFGE8Q08431 387 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 FOXF1Q12946 379 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 NOGQ13253 232 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 ERV3-1Q14264 604 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 GPR18Q14330 331 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 GAMTQ14353 236 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 CLINT1Q14677 625 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 EXOSC7Q15024 291 aaKnown RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 ELOBQ15370 118 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HIST2H2BEQ16778 126 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 MEP1BQ16820 701 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HNRNPA1L2Q32P51 320 aaKnown RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 ITPRIPL2Q3MIP1 535 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 C3orf36Q3SXR2 165 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 POM121L1PQ3SYA9 428 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 GXYLT1Q4G148 440 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SLC22A6Q4U2R8 563 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 KHDC3LQ587J8 217 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 ALG10Q5BKT4 473 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 COA6Q5JTJ3 125 aaKnown RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 AADACL3Q5VUY0 350 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 PLPP4Q5VZY2 271 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 OR2A2Q6IF42 318 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 ADAM5Q6NVV9 412 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms