RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 IL22RA1Q8N6P7 574 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 NUDCD2Q8WVJ2 157 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 GPR137Q96N19 417 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 SEC22CQ9BRL7 303 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 RAB22AQ9UL26 194 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 NOSIPQ9Y314 301 aaKnown RBP5.65□□□□□ -1.5
USP46-202ENST00000451218 ZNF175Q9Y473 711 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 TRAV18A0A075B6X5 111 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 TRGV5A0A0B4J1U4 118 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 SMAD7O15105 426 aaKnown RBP5.65□□□□□ -1.5
USP46-202ENST00000451218 TSPAN9O75954 239 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 ZNF35P13682 527 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 RNPS1Q15287 305 aaKnown RBP5.65□□□□□ -1.5
USP46-202ENST00000451218 MICBQ29980 383 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 OR51S1Q8NGJ8 323 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 OR2AJ1Q8NGZ0 328 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 ZNF671Q8TAW3 534 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 FCAMRQ8WWV6 532 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 FAM46BQ96A09 425 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 CACNG6Q9BXT2 260 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 TP63Q9H3D4 680 aaPredicted RBP5.65□□□□□ -1.5
USP46-202ENST00000451218 HCFC1P51610 2035 aa5.65□□□□□ -1.5
USP46-202ENST00000451218 MBD3L4A6NDZ8 208 aaPredicted RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 MBD3L3A6NE82 208 aaPredicted RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 MBD3L5A6NJ08 208 aaPredicted RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 AKR7A2O43488 359 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 HIST1H1DP16402 221 aaKnown RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 PSMB1P20618 241 aaKnown RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 CCKARP32238 428 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 NHLH1Q02575 133 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 GABRA6Q16445 453 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 CD276Q5ZPR3 534 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 GLT8D1Q68CQ7 371 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 MBD3L2Q8NHZ7 208 aaPredicted RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 PP6455Q8WZ26 134 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 FOXRED1Q96CU9 486 aaPredicted RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 STARD4Q96DR4 205 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 MED30Q96HR3 178 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 ARHGAP5-AS1Q96IT6 56 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 FAM210AQ96ND0 272 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 DMRTA2Q96SC8 542 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 RTBDNQ9BSG5 229 aaPredicted RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 BANF2Q9H503 90 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 CALHM2Q9HA72 323 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 RCC2Q9P258 522 aaKnown RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 TIMM10BQ9Y5J6 103 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 KLRC4-KLRK1H3BQV0 150 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 MPC2O95563 127 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 OPRM1P35372 400 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 NPBWR2P48146 333 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 EIF2B2P49770 351 aaKnown RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 SNTB2Q13425 540 aaKnown RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 CDK10Q15131 360 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 PCGF3Q3KNV8 242 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 NLRC3Q7RTR2 1065 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 C11orf53Q8IXP5 236 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 OR10H5Q8NGA6 315 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 OR52H1Q8NGJ2 320 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 HDHD3Q9BSH5 251 aaPredicted RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 ATG5Q9H1Y0 275 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 PLEK2Q9NYT0 353 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 OSGIN2Q9Y236 505 aa5.65□□□□□ -1.51
USP46-202ENST00000451218 MRPS28Q9Y2Q9 187 aaKnown RBP5.65□□□□□ -1.51
USP46-202ENST00000451218 CCNKO75909 580 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 IL5P05113 134 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 SFTPCP11686 197 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 CHATP28329 748 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 ERVS71-1P61550 626 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 ALKBH6Q3KRA9 238 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 FBXW9Q5XUX1 488 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 NOXA1Q86UR1 476 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 MUC20Q8N307 709 aaPredicted RBP5.64□□□□□ -1.51
USP46-202ENST00000451218 C19orf18Q8NEA5 215 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 SNIP1Q8TAD8 396 aaKnown RBP5.64□□□□□ -1.51
USP46-202ENST00000451218 ZFAND1Q8TCF1 268 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 RADILQ96JH8 1075 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 PECRQ9BY49 303 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 ALX4Q9H161 411 aaPredicted RBP5.64□□□□□ -1.51
USP46-202ENST00000451218 SCPEP1Q9HB40 452 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 DIABLOQ9NR28 239 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 GPR173Q9NS66 373 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 MGAT4CQ9UBM8 478 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 STARD10Q9Y365 291 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 MEGF11A6BM72 1044 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 M0QYG6 137 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 CST4P01036 141 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 CCL11P51671 97 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 CD83Q01151 205 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 IL15RAQ13261 267 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 RPUSD3Q6P087 351 aaKnown RBP5.64□□□□□ -1.51
USP46-202ENST00000451218 FIP1L1Q6UN15 594 aaKnown RBP5.64□□□□□ -1.51
USP46-202ENST00000451218 HOGA1Q86XE5 327 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 ZNF283Q8N7M2 679 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 ADAD2Q8NCV1 583 aaKnown RBP5.64□□□□□ -1.51
USP46-202ENST00000451218 OR10K1Q8NGX5 313 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 GMPPAQ96IJ6 420 aaPredicted RBP5.64□□□□□ -1.51
USP46-202ENST00000451218 PLSCR4Q9NRQ2 329 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 MRPS7Q9Y2R9 242 aaKnown RBP5.64□□□□□ -1.51
USP46-202ENST00000451218 AUP1Q9Y679 476 aa5.64□□□□□ -1.51
USP46-202ENST00000451218 FAM240BA0A1B0GVZ2 78 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms