RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 TOMM34Q15785 309 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 TMEM215Q68D42 235 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 GLCCI1Q86VQ1 547 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 KIAA1958Q8N8K9 716 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 LRRC29Q8WV35 223 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 TMEM56Q96MV1 263 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 OR8B4Q96RC9 309 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 TAF1P21675 1872 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 GPANK1O95872 356 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 PDGFBP01127 241 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 RRASP10301 218 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 PABPC1L2AQ5JQF8 200 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 LYG1Q8N1E2 194 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 OR10D4PQ8NGN7 298 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 LILRB1Q8NHL6 650 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 MCHR2Q969V1 340 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 PLEKHB1Q9UF11 243 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 LEUTXA8MZ59 168 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 AQP8O94778 261 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 CCL2P13500 99 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 TGFBR1P36897 503 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 PPP1CBP62140 327 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 RPUSD3Q6P087 351 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 TMEM65Q6PI78 240 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 BHLHA15Q7RTS1 189 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 TMED6Q8WW62 240 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 SPSB1Q96BD6 273 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 RYDENQ9NUL5 291 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 AMMECR1Q9Y4X0 333 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 ZNF354AO60765 605 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 CD3EP07766 207 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 S100A4P26447 101 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 OR3A4PP47883 348 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 OR51I2Q9H344 312 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 CSF2RBP32927 897 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 OR13D1Q8NGV5 346 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 TMEM18Q96B42 140 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 CMBLQ96DG6 245 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 ADGRG7Q96K78 797 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 FABP4P15090 132 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 GALNSP34059 522 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 SUMO1P63165 101 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 SLC25A35Q3KQZ1 300 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 OR2A5Q96R48 311 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 GABRG3Q99928 467 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 AAMDCQ9H7C9 122 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 SCN7AQ01118 1682 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 RER1O15258 196 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 SBK3P0C264 359 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 SULT1A3P0DMM9 295 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 SULT1A4P0DMN0 295 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 NTF3P20783 257 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 CD80P33681 288 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 MOGAT2Q3SYC2 334 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 C4orf17Q53FE4 359 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 GAL3ST2Q9H3Q3 398 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 DNAJB12Q9NXW2 375 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 RNF24Q9Y225 148 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 SDK1Q7Z5N4 2213 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 MEX3AA1L020 520 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 IL5P05113 134 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 ZNF32P17041 273 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 GABRB1P18505 474 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 OPRK1P41145 380 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 CNN1P51911 297 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 PRRX1P54821 245 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 C16orf47Q6ZP98 133 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 LINC01555Q8NAE3 123 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 ZNF485Q8NCK3 441 aa12.5□□□□□ -0.41
RAPGEF3-205ENST00000449771 LY86O95711 162 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 SRD5A2P31213 254 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 DCTDP32321 178 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 H3F3AP84243 136 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 UBE3DQ7Z6J8 389 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 SMIM6P0DI80 62 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 GUCA2AQ02747 115 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 FABP9Q0Z7S8 132 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 GPNMBQ14956 572 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 FCGR3BO75015 233 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 FBP1P09467 338 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 PPP1CAP62136 330 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 FAM109BQ6ICB4 259 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 ACSM6Q6P461 480 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 MOB1BQ7L9L4 216 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 TMEM229BQ8NBD8 167 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 DNASE2O00115 360 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 APOBEC4Q8WW27 367 aaKnown RBP12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 DERL3Q96Q80 235 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 PSG11Q9UQ72 335 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 TRAV1-2A0A0B4J238 106 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 IGFBP7Q16270 282 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 C20orf196Q8IYI0 205 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 AMER3Q8N944 861 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 NPEPL1Q8NDH3 523 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 OR5D13Q8NGL4 314 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 YIPF6Q96EC8 236 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 POM121Q96HA1 1249 aa12.49□□□□□ -0.41
RAPGEF3-205ENST00000449771 C3orf80F5H4A9 247 aa12.48□□□□□ -0.41
RAPGEF3-205ENST00000449771 KRASP01116 189 aa12.48□□□□□ -0.41
RAPGEF3-205ENST00000449771 EPXP11678 715 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms