RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PTX4Q96A99 478 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 RNF170Q96K19 258 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 GPER1Q99527 375 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 TLNRD1Q9H1K6 362 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 MSL2Q9HCI7 577 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 OR5V1Q9UGF6 321 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 MRPS28Q9Y2Q9 187 aaKnown RBP16.4■□□□□ 0.22
RPS28-202ENST00000449223 ICE1Q9Y2F5 2266 aa16.4■□□□□ 0.22
RPS28-202ENST00000449223 A0A0B4J203 849 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 LOC100289279A0A1B0GTE1 492 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 LRP5LA4QPB2 252 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 B9A039 149 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 SNRPBP14678 240 aaKnown RBP16.39■□□□□ 0.21
RPS28-202ENST00000449223 ARSBP15848 533 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 CD200P41217 278 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 QRFPP83859 136 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 MZT1Q08AG7 82 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 PDZK1IP1Q13113 114 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 TMEM200AQ86VY9 491 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 CALHM1Q8IU99 346 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 SAXO1Q8IYX7 474 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 OR51D1Q8NGF3 324 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 DIRC2Q96SL1 478 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 NKX3-1Q99801 234 aaPredicted RBP16.39■□□□□ 0.21
RPS28-202ENST00000449223 PKIBQ9C010 78 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 CXXC4Q9H2H0 198 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 MIXL1Q9H2W2 232 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 OR51I2Q9H344 312 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 IL36GQ9NZH8 169 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 COMMD3Q9UBI1 195 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 ZDHHC8Q9ULC8 765 aa16.39■□□□□ 0.21
RPS28-202ENST00000449223 RAI1Q7Z5J4 1906 aaPredicted RBP16.39■□□□□ 0.21
RPS28-202ENST00000449223 HELZ2Q9BYK8 2649 aaKnown RBP16.39■□□□□ 0.21
RPS28-202ENST00000449223 H0YL77 283 aa16.38■□□□□ 0.21
RPS28-202ENST00000449223 POU3F4P49335 361 aa16.38■□□□□ 0.21
RPS28-202ENST00000449223 MAB21L1Q13394 359 aa16.38■□□□□ 0.21
RPS28-202ENST00000449223 SWI5Q1ZZU3 235 aa16.38■□□□□ 0.21
RPS28-202ENST00000449223 MST1LQ2TV78 715 aa16.38■□□□□ 0.21
RPS28-202ENST00000449223 C2orf76Q3KRA6 126 aa16.38■□□□□ 0.21
RPS28-202ENST00000449223 AWAT2Q6E213 333 aa16.38■□□□□ 0.21
RPS28-202ENST00000449223 WDR86Q86TI4 376 aa16.38■□□□□ 0.21
RPS28-202ENST00000449223 OR10AD1Q8NGE0 317 aa16.38■□□□□ 0.21
RPS28-202ENST00000449223 TNFAIP8L1Q8WVP5 186 aa16.38■□□□□ 0.21
RPS28-202ENST00000449223 C14orf119Q9NWQ9 140 aa16.38■□□□□ 0.21
RPS28-202ENST00000449223 NKIRAS2Q9NYR9 191 aa16.38■□□□□ 0.21
RPS28-202ENST00000449223 PKDREJQ9NTG1 2253 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 TMEM14DPA8MWL7 114 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 CLDN1O95832 211 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 APOA1P02647 267 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 S100A5P33763 92 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 ETV6P41212 452 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 HAAOP46952 286 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 ZNF81P51508 661 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 P2RY14Q15391 338 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 NKPD1Q17RQ9 610 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 OR2W3Q7Z3T1 314 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 LRRC28Q86X40 367 aaPredicted RBP16.37■□□□□ 0.21
RPS28-202ENST00000449223 LAX1Q8IWV1 398 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 ZNF611Q8N823 705 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 Q8NFD4 153 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 OR5H6Q8NGV6 325 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 FBXW5Q969U6 566 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 RFT1Q96AA3 541 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 ABCG5Q9H222 651 aa16.37■□□□□ 0.21
RPS28-202ENST00000449223 FBXO9Q9UK97 447 aaPredicted RBP16.37■□□□□ 0.21
RPS28-202ENST00000449223 ARFGEF3Q5TH69 2177 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 M0R233 179 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 RGS5O15539 181 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 CD55P08174 381 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 VSIG8P0DPA2 414 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 RAB6AP20340 208 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 GATA4P43694 442 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 IL24Q13007 206 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 ZNF154Q13106 437 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 UBE2NLQ5JXB2 153 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 GLIPR1L1Q6UWM5 242 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 C1QL2Q7Z5L3 287 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 CDH24Q86UP0 819 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 MUC15Q8N387 334 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 SAMD12Q8N8I0 201 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 OR5D18Q8NGL1 313 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 SLC25A38Q96DW6 304 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 ELMOD3Q96FG2 381 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 TSC22D3Q99576 134 aa16.36■□□□□ 0.21
RPS28-202ENST00000449223 USP9YO00507 2555 aaPredicted RBP16.36■□□□□ 0.21
RPS28-202ENST00000449223 TMEM272A0A1B0GTI8 110 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 A0A1W2PPR1 153 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 C17orf100A8MU93 164 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 F5H5P2 479 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 J3QT63 122 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 HS3ST1O14792 307 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 HPGDSO60760 199 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 ZNF780AO75290 641 aaPredicted RBP16.35■□□□□ 0.21
RPS28-202ENST00000449223 ACAA1P09110 424 aaPredicted RBP16.35■□□□□ 0.21
RPS28-202ENST00000449223 GPR176Q14439 515 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 CCDC190Q86UF4 302 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 OR2Z1Q8NG97 314 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 KCNG3Q8TAE7 436 aa16.35■□□□□ 0.21
RPS28-202ENST00000449223 GTF3AQ92664 365 aaKnown RBP16.35■□□□□ 0.21
RPS28-202ENST00000449223 RHOFQ9HBH0 211 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms