RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 ECDO95905 644 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 ATP6V1E1P36543 226 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 CDONQ4KMG0 1287 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 TP53I3Q53FA7 332 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 ARMCX4Q5H9R4 360 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 CLVS2Q5SYC1 327 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 KCTD20Q7Z5Y7 419 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 THAP5Q7Z6K1 395 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 BPIFB2Q8N4F0 458 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 FAM216BQ8N7L0 139 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 SIGLECL1Q8N7X8 197 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 FAM216AQ8WUB2 273 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 LGALS12Q96DT0 336 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 DMRTB1Q96MA1 342 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 TECTBQ96PL2 329 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 TBX15Q96SF7 602 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 SIRPDQ9H106 197 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 MRPS18AQ9NVS2 196 aaKnown RBP11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 RPUSD1Q9UJJ7 312 aaKnown RBP11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 ZNF222Q9UK12 451 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 GMPPBQ9Y5P6 360 aa11.63□□□□□ -0.55
RTFDC1-204ENST00000449062 IGKV1D-17A0A075B6S4 117 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 LOC100130705A0A1B0GUX0 176 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 A6NIN4 97 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 TFF1P04155 84 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 ACAA1P09110 424 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 SELLP14151 372 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 MPZP25189 248 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 OR12D2P58182 307 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 NANOS3P60323 173 aaKnown RBP11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 DGUOKQ16854 277 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 KCTD8Q6ZWB6 473 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 COMMD2Q86X83 199 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 EGFL6Q8IUX8 553 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 RDH10Q8IZV5 341 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 OR2G2Q8NGZ5 317 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 ZNF671Q8TAW3 534 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 GAFA1Q96PS6 74 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 GPR173Q9NS66 373 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 SNTG1Q9NSN8 517 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 ACOXLQ9NUZ1 547 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 GTF2A1LQ9UNN4 478 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 MAB21L2Q9Y586 359 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 MGAM2Q2M2H8 2515 aa11.62□□□□□ -0.55
RTFDC1-204ENST00000449062 IGHV3OR16-10A0A075B7F0 116 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 CENPVL3A0A0U1RRI6 287 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 OR2AT4A6NND4 320 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 GPR37O15354 613 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 SIGLEC5O15389 551 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 SFTPBP07988 381 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 PGA5P0DJD9 388 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 PSG2P11465 335 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 GMFBP60983 142 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 ERVK11-1P61568 191 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 UBE2V2Q15819 145 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 PLCXD3Q63HM9 321 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 HAGHLQ6PII5 290 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 SLC36A1Q7Z2H8 476 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 ACBD7Q8N6N7 88 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 PNLDC1Q8NA58 520 aaKnown RBP11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 C8orf46Q8TAG6 207 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 APH1BQ8WW43 257 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 WDFY2Q96P53 400 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 JMJD8Q96S16 334 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 CNTD2Q9H8S5 307 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 AMBNQ9NP70 447 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 RASL12Q9NYN1 266 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 FRRS1LQ9P0K9 344 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 NLKQ9UBE8 527 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 MYRFQ9Y2G1 1151 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 PCDHGB1Q9Y5G3 927 aa11.61□□□□□ -0.55
RTFDC1-204ENST00000449062 IGKV1-27A0A075B6S5 117 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 DAPL1A0PJW8 107 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 TMEM89A2RUT3 159 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 TRIM77I1YAP6 450 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 SYT7O43581 403 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 SYNGR1O43759 233 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 MPZL2O60487 215 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 WBP4O75554 376 aaKnown RBP11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 BAG2O95816 211 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 IGHA1P01876 353 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 DBTP11182 482 aaKnown RBP11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 GLRA1P23415 457 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 COMPP49747 757 aaPredicted RBP11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 CCR9P51686 369 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 BPIFB3P59826 476 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 ARF6P62330 175 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 UBA52P62987 128 aaKnown RBP11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 ACTC1P68032 377 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 ACTA1P68133 377 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 ZNF91Q05481 1191 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 ODF4Q2M2E3 257 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 ZNF573Q86YE8 665 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 CALHM1Q8IU99 346 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 POC1AQ8NBT0 407 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 CCDC54Q8NEL0 328 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 PELI1Q96FA3 418 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 SDSLQ96GA7 329 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 MED30Q96HR3 178 aa11.6□□□□□ -0.55
RTFDC1-204ENST00000449062 ZNF488Q96MN9 340 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms