RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MRPS24Q96EL2 167 aaKnown RBP9.14□□□□□ -0.95
VIPAS39-203ENST00000448935 PLPPR2Q96GM1 343 aa9.14□□□□□ -0.95
VIPAS39-203ENST00000448935 ST6GAL2Q96JF0 529 aa9.14□□□□□ -0.95
VIPAS39-203ENST00000448935 SLC25A21Q9BQT8 299 aaPredicted RBP9.14□□□□□ -0.95
VIPAS39-203ENST00000448935 OR51J1Q9H342 316 aa9.14□□□□□ -0.95
VIPAS39-203ENST00000448935 GHITMQ9H3K2 345 aa9.14□□□□□ -0.95
VIPAS39-203ENST00000448935 BANF2Q9H503 90 aa9.14□□□□□ -0.95
VIPAS39-203ENST00000448935 PLSCR4Q9NRQ2 329 aa9.14□□□□□ -0.95
VIPAS39-203ENST00000448935 NKIRAS2Q9NYR9 191 aa9.14□□□□□ -0.95
VIPAS39-203ENST00000448935 EIF3KQ9UBQ5 218 aaKnown RBP9.14□□□□□ -0.95
VIPAS39-203ENST00000448935 SCP2D1Q9UJQ7 156 aa9.14□□□□□ -0.95
VIPAS39-203ENST00000448935 PLEKHA6Q9Y2H5 1048 aa9.14□□□□□ -0.95
VIPAS39-203ENST00000448935 A0A0A6YYJ9 748 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 MEIS3P1A6NDR6 274 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 ZNF503-AS2A6NEH8 195 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 SERPINE3A8MV23 424 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 DISC1C4P0D8 188 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 EIF4EBP3O60516 100 aaPredicted RBP9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 CA11O75493 328 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 CST4P01036 141 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 CD74P04233 296 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 CD3DP04234 171 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 IL5P05113 134 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 COX5AP20674 150 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 SERPINA2P20848 420 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 KIR2DL2P43627 348 aaPredicted RBP9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 MAB21L1Q13394 359 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 GK2Q14410 553 aaPredicted RBP9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 LINC00303Q3SY05 128 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 TM4SF20Q53R12 229 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 ACTBL2Q562R1 376 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 UNQ6126/PRO20091Q6UXV3 157 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 ASCL4Q6XD76 172 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 NLRC3Q7RTR2 1065 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 SPACA3Q8IXA5 215 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 C17orf78Q8N4C9 275 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 ZSCAN4Q8NAM6 433 aaPredicted RBP9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 OR5D18Q8NGL1 313 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 GIMAP1Q8WWP7 306 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 NINJ1Q92982 152 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 RNF170Q96K19 258 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 ZMAT3Q9HA38 289 aaKnown RBP9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 OBP2BQ9NPH6 170 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 IL36GQ9NZH8 169 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 DKK4Q9UBT3 224 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 PROCRQ9UNN8 238 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 FREM2Q5SZK8 3169 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 ARPC1BO15143 372 aaKnown RBP9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 AKR7A2O43488 359 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 RAD51DO75771 328 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 GNB3P16520 340 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 UCNP55089 124 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 CBX3Q13185 183 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 P2RY6Q15077 328 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 GABRA6Q16445 453 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 C21orf62-AS1Q17RA5 79 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 RNASE10Q5GAN6 216 aaKnown RBP9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 TMEM255AQ5JRV8 349 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 CRIP3Q6Q6R5 217 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 BEND4Q6ZU67 534 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 RNF144BQ7Z419 303 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 ZDHHC23Q8IYP9 409 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 OR56B2PQ8NGI1 322 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 OR8S1Q8NH09 359 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 CMBLQ96DG6 245 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 HIST1H2AAQ96QV6 131 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 PRRT1Q99946 306 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 GINS4Q9BRT9 223 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 NICN1Q9BSH3 213 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 TRAF4Q9BUZ4 470 aaPredicted RBP9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 PAPOLGQ9BWT3 736 aaKnown RBP9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 OR10A4Q9H209 315 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 TP63Q9H3D4 680 aaPredicted RBP9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 CDH20Q9HBT6 801 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 PTTG3PQ9NZH4 202 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 STARD10Q9Y365 291 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 MPC1Q9Y5U8 109 aa9.13□□□□□ -0.95
VIPAS39-203ENST00000448935 GVINP1Q7Z2Y8 2422 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 DOCK7Q96N67 2140 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 A0A0A6YYD4 124 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 ANKRD30BLA7E2S9 258 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 SNRPGP15A8MWD9 76 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 K7ENP7 123 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 MFNGO00587 321 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 SOCS1O15524 211 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 AMY2AP04746 511 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 TPOP07202 933 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 CCL2P13500 99 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 ZNF14P17017 642 aaPredicted RBP9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 SPINK2P20155 84 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 TUBG1P23258 451 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 MPZP25189 248 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 BLVRBP30043 206 aaPredicted RBP9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 CD83Q01151 205 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 ARFRP1Q13795 201 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 CEACAM21Q3KPI0 293 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 PLEKHN1Q494U1 663 aaPredicted RBP9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 C1orf185Q5T7R7 199 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 FAAP20Q6NZ36 180 aa9.12□□□□□ -0.95
VIPAS39-203ENST00000448935 GLDNQ6ZMI3 551 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms