RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 POFUT1Q9H488 388 aa15.28■□□□□ 0.04
LMNA-208ENST00000448611 PTTG3PQ9NZH4 202 aa15.28■□□□□ 0.04
LMNA-208ENST00000448611 ZNF850A8MQ14 1090 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 CXCL3P19876 107 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 FOXF2Q12947 444 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 MEF2DQ14814 521 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 GABRA6Q16445 453 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 PLEKHN1Q494U1 663 aaPredicted RBP15.27■□□□□ 0.04
LMNA-208ENST00000448611 OR52W1Q6IF63 320 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 ZNF585AQ6P3V2 769 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 SLC30A7Q8NEW0 376 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 WBP1Q96G27 269 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 Q96M66 194 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 IFT46Q9NQC8 304 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 CRIM1Q9NZV1 1036 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 GPR160Q9UJ42 338 aa15.27■□□□□ 0.04
LMNA-208ENST00000448611 IGKV1-12A0A0C4DH73 117 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 LYZL6O75951 148 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 PLATP00750 562 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 CST4P01036 141 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 IGKV1D-12P01611 117 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 C1QBP02746 253 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 VSIG10L2P0DP72 767 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 ZNF14P17017 642 aaPredicted RBP15.27■□□□□ 0.03
LMNA-208ENST00000448611 BLVRBP30043 206 aaPredicted RBP15.27■□□□□ 0.03
LMNA-208ENST00000448611 RSU1Q15404 277 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 IDO2Q6ZQW0 420 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 SLC36A1Q7Z2H8 476 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 LIX1LQ8IVB5 337 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 CCDC36Q8IYA8 594 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 BPIFB2Q8N4F0 458 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 PXT1Q8NFP0 134 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 ZCCHC14Q8WYQ9 949 aaKnown RBP15.27■□□□□ 0.03
LMNA-208ENST00000448611 ST8SIA4Q92187 359 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 SLC6A7Q99884 636 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 PECRQ9BY49 303 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 OPA3Q9H6K4 179 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 IGF2RP11717 2491 aa15.27■□□□□ 0.03
LMNA-208ENST00000448611 SSNA1O43805 119 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 NAT1P18440 290 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 COX5AP20674 150 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 MPZP25189 248 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 PDZK1IP1Q13113 114 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 RNASE10Q5GAN6 216 aaKnown RBP15.26■□□□□ 0.03
LMNA-208ENST00000448611 SEZ6L2Q6UXD5 910 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 SEM1Q6ZVN7 128 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 RFPL4BQ6ZWI9 263 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 CSNK2A3Q8NEV1 391 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 SNAPC3Q92966 411 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 BOD1Q96IK1 185 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 GPR137Q96N19 417 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 OCSTAMPQ9BR26 566 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 TRAF4Q9BUZ4 470 aaPredicted RBP15.26■□□□□ 0.03
LMNA-208ENST00000448611 PAPOLGQ9BWT3 736 aaKnown RBP15.26■□□□□ 0.03
LMNA-208ENST00000448611 PLSCR4Q9NRQ2 329 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 SLC2A8Q9NY64 477 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 IL36GQ9NZH8 169 aa15.26■□□□□ 0.03
LMNA-208ENST00000448611 MBD3L4A6NDZ8 208 aaPredicted RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 MBD3L3A6NE82 208 aaPredicted RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 MBD3L5A6NJ08 208 aaPredicted RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 MKRN2OSH3BPM6 223 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 ZNF780AO75290 641 aaPredicted RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 HTR3BO95264 441 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 RLN1P04808 185 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 TBPP20226 339 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 GZMKP49863 264 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 PRDX4Q13162 271 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 ZNF626Q68DY1 528 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 MYPOPQ86VE0 399 aaPredicted RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 MBD3L2Q8NHZ7 208 aaPredicted RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 SLC25A21Q9BQT8 299 aaPredicted RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 FGF23Q9GZV9 251 aaPredicted RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 SCP2D1Q9UJQ7 156 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 DOCK7Q96N67 2140 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 CHD8Q9HCK8 2581 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 SPENQ96T58 3664 aaKnown RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 A0A1W2PR80 420 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 PQLC2LA1A4F0 135 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 SNRPGP15A8MWD9 76 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 DISC1C4P0D8 188 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 TNFSF13O75888 250 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 CRYABP02511 175 aaKnown RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 CSTBP04080 98 aaKnown RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 CELA3BP08861 270 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 HRH1P35367 487 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 UBE2NP61088 152 aaKnown RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 OR13C8Q8NGS7 320 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 HPSE2Q8WWQ2 592 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 FBXW5Q969U6 566 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 GPN1Q9HCN4 374 aaPredicted RBP15.25■□□□□ 0.03
LMNA-208ENST00000448611 LUZP4Q9P127 313 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 ZNF222Q9UK12 451 aa15.25■□□□□ 0.03
LMNA-208ENST00000448611 MEIKINA0A087WXM9 373 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 SERPINE3A8MV23 424 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 SMLR1H3BR10 107 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 TPOP07202 933 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 ANXA3P12429 323 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 HOXB1P14653 301 aaPredicted RBP15.24■□□□□ 0.03
LMNA-208ENST00000448611 ARFRP1Q13795 201 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 ARL6IP1Q15041 203 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms