RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 FKBP14Q9NWM8 211 aa11.76□□□□□ -0.53
GTF3C3-206ENST00000448539 ERVK-18Q9QC07 812 aa11.76□□□□□ -0.53
GTF3C3-206ENST00000448539 MIOXQ9UGB7 285 aa11.76□□□□□ -0.53
GTF3C3-206ENST00000448539 DHDHQ9UQ10 334 aa11.76□□□□□ -0.53
GTF3C3-206ENST00000448539 FOXH1O75593 365 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 CDK1P06493 297 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 CPT2P23786 658 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 CFHR2P36980 270 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 HAAOP46952 286 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 WNT4P56705 351 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 CDK5R1Q15078 307 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 ESCO2Q56NI9 601 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 HAGHLQ6PII5 290 aaPredicted RBP11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 DCDC5Q6ZRR9 648 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 GCSAMQ8N6F7 178 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 OR8B3Q8NGG8 313 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 OR10AC1Q8NH08 325 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 NPRL2Q8WTW4 380 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 ADAT3Q96EY9 351 aaPredicted RBP11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 BORCS8Q96FH0 119 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 OR8B2Q96RD0 313 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 PDCD1LG2Q9BQ51 273 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 MND1Q9BWT6 205 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 NEK6Q9HC98 313 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 DNAJB11Q9UBS4 358 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 BLOC1S6Q9UL45 172 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 POLDIP2Q9Y2S7 368 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 PCDHGB5Q9Y5G0 923 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 CSPG4Q6UVK1 2322 aa11.75□□□□□ -0.53
GTF3C3-206ENST00000448539 TRAV20A0A0B4J274 112 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 PQLC2LA1A4F0 135 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 INAFM1C9JVW0 142 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 J3QT63 122 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 OGG1O15527 345 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 NDUFA2O43678 99 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 LHBP01229 141 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 PRKACBP22694 351 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 FUT6P51993 359 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 DVL1P1P54792 670 aaPredicted RBP11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 GMFBP60983 142 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 UBE2V2Q15819 145 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 RBM48Q5RL73 367 aaKnown RBP11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 XAF1Q6GPH4 301 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 NANOGP1Q8N7R0 232 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 OR51A4Q8NGJ6 313 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 GPR148Q8TDV2 347 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 AQP3Q92482 292 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 TMEM186Q96B77 213 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 SMIM19Q96E16 107 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 NEIL1Q96FI4 390 aaPredicted RBP11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 CCDC90BQ9GZT6 254 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 LRCH1Q9Y2L9 728 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 ABCA1O95477 2261 aa11.74□□□□□ -0.53
GTF3C3-206ENST00000448539 NSD1Q96L73 2696 aaPredicted RBP11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 IGHV3OR15-7A0A075B7D8 119 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 SRRM5B3KS81 715 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 AKR7A2O43488 359 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 RGS10O43665 173 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 PLPP2O43688 288 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 GYPAP02724 150 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 CD2P06729 351 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 WNT2P09544 360 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 MUC1P15941 1255 aaPredicted RBP11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 EGR1P18146 543 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 ATF1P18846 271 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 HNF1AP20823 631 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 GLRA1P23415 457 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 ATP1B3P54709 279 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 SLC35A2P78381 396 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 LCN2P80188 198 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 HOXA4Q00056 320 aaPredicted RBP11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 RNLSQ5VYX0 342 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 TEX36Q5VZQ5 186 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 UTS2BQ765I0 119 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 SERPINA12Q8IW75 414 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 OR5D14Q8NGL3 314 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 SSBP3Q9BWW4 388 aaPredicted RBP11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 CDCA4Q9BXL8 241 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 RASSF4Q9H2L5 321 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 HIF1ANQ9NWT6 349 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 ZNF281Q9Y2X9 895 aa11.73□□□□□ -0.53
GTF3C3-206ENST00000448539 DNHD1Q96M86 4753 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 PNMA8CA0A1B0GUJ8 204 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 F5H0A9 414 aaPredicted RBP11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 ADAM20O43506 726 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 RHBDL1O75783 438 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 CRHBPP24387 322 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 EEF1B2P24534 225 aaKnown RBP11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 SOX2P48431 317 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 PITPNBP48739 271 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 RBP2P50120 134 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 GNB2P62879 340 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 LHFPL2Q6ZUX7 228 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 ANGPTL5Q86XS5 388 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 FAM90A1Q86YD7 464 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 ZFP41Q8N8Y5 198 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 DNAAF1Q8NEP3 725 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 OR13C9Q8NGT0 318 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 GHSRQ92847 366 aa11.72□□□□□ -0.53
GTF3C3-206ENST00000448539 SPSB1Q96BD6 273 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms