RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SGCZQ96LD1 299 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 C9orf170A2RU37 121 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 M0R296 226 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 WISP2O76076 250 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 CD59P13987 128 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 RBMXP38159 391 aaKnown RBP12.9□□□□□ -0.34
SF1-211ENST00000448404 ZNF239Q16600 458 aaKnown RBP12.9□□□□□ -0.34
SF1-211ENST00000448404 RGS7BPQ6MZT1 257 aaPredicted RBP12.9□□□□□ -0.34
SF1-211ENST00000448404 ZNF546Q86UE3 836 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 KCNG3Q8TAE7 436 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 EDEM2Q9BV94 578 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 OR10A2Q9H208 303 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 CSAG2Q9Y5P2 127 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 ZNF98A6NK75 572 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 LINC01387J3KSC0 135 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 EFSO43281 561 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 KNG1P01042 644 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 AMY2BP19961 511 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 CCL1P22362 96 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 ZNF84P51523 738 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 PIGYQ3MUY2 71 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 GPR137CQ8N3F9 429 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 OR2V1Q8NHB1 315 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 SSC4DQ8WTU2 575 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 SLC25A21Q9BQT8 299 aaPredicted RBP12.9□□□□□ -0.34
SF1-211ENST00000448404 FAAP24Q9BTP7 215 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 C5orf66Q9H5L9 145 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 MOB1AQ9H8S9 216 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 TMEM38BQ9NVV0 291 aa12.9□□□□□ -0.34
SF1-211ENST00000448404 PTPRZ1P23471 2315 aaPredicted RBP12.9□□□□□ -0.35
SF1-211ENST00000448404 KIAA1549Q9HCM3 1950 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 DMXL2Q8TDJ6 3036 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 B4E171 279 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 MFNGO00587 321 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 HLA-HP01893 362 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 NMBP08949 121 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 TSPAN7P41732 249 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 ZNF92Q03936 586 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 PGAP1Q75T13 922 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 TMPRSS7Q7RTY8 843 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 NAXDQ8IW45 347 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 FOXRED2Q8IWF2 684 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 CPEB3Q8NE35 698 aaKnown RBP12.89□□□□□ -0.35
SF1-211ENST00000448404 ADGRG7Q96K78 797 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 FOXB1Q99853 325 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 C5orf51A6NDU8 294 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 KRBOX1C9JBD0 128 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 SYNGR3O43761 229 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 MELTFP08582 738 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 AKAP13Q12802 2813 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 SSPNQ14714 243 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 ZNF169Q14929 603 aaPredicted RBP12.89□□□□□ -0.35
SF1-211ENST00000448404 FAM27BQ5VT28 67 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 SLC16A14Q7RTX9 510 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 TUSC5Q8IXB3 177 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 PNLDC1Q8NA58 520 aaKnown RBP12.89□□□□□ -0.35
SF1-211ENST00000448404 CSNK2A3Q8NEV1 391 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 OR13G1Q8NGZ3 307 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 TMEM230Q96A57 120 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 PTX4Q96A99 478 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 UPB1Q9UBR1 384 aa12.89□□□□□ -0.35
SF1-211ENST00000448404 IGHV3-64DA0A0J9YX35 117 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 DHRS7CA6NNS2 312 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 VAMP5O95183 116 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 SERPINA7P05543 415 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 RPS27AP62979 156 aaKnown RBP12.88□□□□□ -0.35
SF1-211ENST00000448404 UNQ6126/PRO20091Q6UXV3 157 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 SULF2Q8IWU5 870 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 OR5M8Q8NGP6 311 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 CCDC107Q8WV48 283 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 NTNG2Q96CW9 530 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 PRRT1Q99946 306 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 IER2Q9BTL4 223 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 CHST5Q9GZS9 411 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 ACKR4Q9NPB9 350 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 SLC7A10Q9NS82 523 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 EHFQ9NZC4 300 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 PFDN2Q9UHV9 154 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 COL27A1Q8IZC6 1860 aaPredicted RBP12.88□□□□□ -0.35
SF1-211ENST00000448404 IGKV1-12A0A0C4DH73 117 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 IGKV1D-12P01611 117 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 CRYGSP22914 178 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 MRPS34P82930 218 aaKnown RBP12.88□□□□□ -0.35
SF1-211ENST00000448404 ECH1Q13011 328 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 ZNF660Q6AZW8 331 aaPredicted RBP12.88□□□□□ -0.35
SF1-211ENST00000448404 GSG1LQ6UXU4 331 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 LYG2Q86SG7 212 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 SLC25A42Q86VD7 318 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 OR1F12Q8NHA8 337 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 WNT5BQ9H1J7 359 aa12.88□□□□□ -0.35
SF1-211ENST00000448404 RP2O75695 350 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 HPP00738 406 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 IGLV3-1P01715 115 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 OTX1P32242 354 aaPredicted RBP12.87□□□□□ -0.35
SF1-211ENST00000448404 SERPINF1P36955 418 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 OVCH2Q7RTZ1 564 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 PIGCQ92535 297 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 HS3ST6Q96QI5 342 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 TAAR9Q96RI9 348 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 S100A13Q99584 98 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms