RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 CD80P33681 288 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 KIR3DL2P43630 455 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 NPY4RP50391 375 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 GPM6AP51674 278 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 NANOS3P60323 173 aaKnown RBP13.71□□□□□ -0.21
SF3A1-204ENST00000447376 HNRNPA0Q13151 305 aaKnown RBP13.71□□□□□ -0.21
SF3A1-204ENST00000447376 CEP78Q5JTW2 689 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 FAM201AQ5SY85 155 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 SFRP4Q6FHJ7 346 aaPredicted RBP13.71□□□□□ -0.21
SF3A1-204ENST00000447376 BTNL3Q6UXE8 466 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 Q6ZSR3 168 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 ZNF826PQ6ZT77 177 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 KRT74Q7RTS7 529 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 OR5A2Q8NGI9 324 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 OR14K1Q8NGZ2 314 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 C10orf35Q96D05 121 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 MRI1Q9BV20 369 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 CLEC2DQ9UHP7 191 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 HHLA2Q9UM44 414 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 PCDHGB5Q9Y5G0 923 aa13.71□□□□□ -0.21
SF3A1-204ENST00000447376 OR4C45A6NMZ5 311 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 A8MXK9 166 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 ZNF732B4DXR9 585 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 ADAM20O43506 726 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 GATBO75879 557 aaKnown RBP13.7□□□□□ -0.22
SF3A1-204ENST00000447376 C21orf33P30042 268 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-204ENST00000447376 RBMXP38159 391 aaKnown RBP13.7□□□□□ -0.22
SF3A1-204ENST00000447376 TAS2R43P59537 309 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 OR2G6Q5TZ20 316 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 RNLSQ5VYX0 342 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 WDR82Q6UXN9 313 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 GCSAMQ8N6F7 178 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 C19orf18Q8NEA5 215 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 OR10Z1Q8NGY1 313 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 OR5AK2Q8NH90 309 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 ZNF671Q8TAW3 534 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 GATAD2BQ8WXI9 593 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 RNF166Q96A37 237 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-204ENST00000447376 TECTBQ96PL2 329 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 MND1Q9BWT6 205 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 TLNRD1Q9H1K6 362 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 C7orf69Q9H7B7 122 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 METRNQ9UJH8 293 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 SLC7A11Q9UPY5 501 aa13.7□□□□□ -0.22
SF3A1-204ENST00000447376 ABCA2Q9BZC7 2435 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 PHF1O43189 567 aaPredicted RBP13.69□□□□□ -0.22
SF3A1-204ENST00000447376 RGS10O43665 173 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 ZNF20P17024 532 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 CRHBPP24387 322 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 THBS2P35442 1172 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 CFHR2P36980 270 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 SLC35A2P78381 396 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 CD276Q5ZPR3 534 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 SLC36A1Q7Z2H8 476 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 ZNF573Q86YE8 665 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 RDH10Q8IZV5 341 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 SCCPDHQ8NBX0 429 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 OR13C3Q8NGS6 347 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 HPSE2Q8WWQ2 592 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 C12orf43Q96C57 262 aaKnown RBP13.69□□□□□ -0.22
SF3A1-204ENST00000447376 CDCA4Q9BXL8 241 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 DUSP21Q9H596 190 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 POLR3KQ9Y2Y1 108 aaPredicted RBP13.69□□□□□ -0.22
SF3A1-204ENST00000447376 NAV3Q8IVL0 2385 aa13.69□□□□□ -0.22
SF3A1-204ENST00000447376 ANKRD61A6NGH8 418 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 NKX6-3A6NJ46 265 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 E9PI62 339 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 H3BSH0 61 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 ZFPL1O95159 310 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 LHBP01229 141 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 OCM2P0CE71 109 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 OCMP0CE72 109 aaPredicted RBP13.68□□□□□ -0.22
SF3A1-204ENST00000447376 EEF1B2P24534 225 aaKnown RBP13.68□□□□□ -0.22
SF3A1-204ENST00000447376 ZFP36P26651 326 aaKnown RBP13.68□□□□□ -0.22
SF3A1-204ENST00000447376 WNT4P56705 351 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 SEC61A1P61619 476 aaKnown RBP13.68□□□□□ -0.22
SF3A1-204ENST00000447376 TEX36Q5VZQ5 186 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 WDR86Q86TI4 376 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 PRIMA1Q86XR5 153 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 NANOGP1Q8N7R0 232 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 NANPQ8TBE9 248 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 PP6455Q8WZ26 134 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 RPL3LQ92901 407 aaKnown RBP13.68□□□□□ -0.22
SF3A1-204ENST00000447376 CCDC90BQ9GZT6 254 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 METTL17Q9H7H0 456 aaPredicted RBP13.68□□□□□ -0.22
SF3A1-204ENST00000447376 PPP1R3EQ9H7J1 279 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 NEK6Q9HC98 313 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 GPR173Q9NS66 373 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 POLDIP2Q9Y2S7 368 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 AUP1Q9Y679 476 aa13.68□□□□□ -0.22
SF3A1-204ENST00000447376 SRRM5B3KS81 715 aa13.67□□□□□ -0.22
SF3A1-204ENST00000447376 TMPRSS2O15393 492 aa13.67□□□□□ -0.22
SF3A1-204ENST00000447376 OGG1O15527 345 aa13.67□□□□□ -0.22
SF3A1-204ENST00000447376 GYPAP02724 150 aa13.67□□□□□ -0.22
SF3A1-204ENST00000447376 GLRA1P23415 457 aa13.67□□□□□ -0.22
SF3A1-204ENST00000447376 GTF2A1P52655 376 aaPredicted RBP13.67□□□□□ -0.22
SF3A1-204ENST00000447376 GMFBP60983 142 aa13.67□□□□□ -0.22
SF3A1-204ENST00000447376 CDK5R1Q15078 307 aa13.67□□□□□ -0.22
SF3A1-204ENST00000447376 CNN3Q15417 329 aaKnown RBP13.67□□□□□ -0.22
SF3A1-204ENST00000447376 ARMCX4Q5H9R4 360 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms