RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 TBC1D28Q2M2D7 210 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 SCGB2B2Q4G0G5 96 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 HIKESHIQ53FT3 197 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 DMRTC1Q5HYR2 192 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 ARRDC1Q8N5I2 433 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 GVQW1Q8N7I0 195 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 OR10K1Q8NGX5 313 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 OR6K3Q8NGY3 331 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 OR4K15Q8NH41 348 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 ASB13Q8WXK3 278 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 SLC6A7Q99884 636 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 MGAT4CQ9UBM8 478 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 HSF4Q9ULV5 492 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 SNAPC5O75971 98 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 VSIG10L2P0DP72 767 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 HRH1P35367 487 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 TAS2R46P59540 309 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 VAX1Q5SQQ9 334 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 Q6ZS92 163 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 Q6ZT83 130 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 OR56B2PQ8NGI1 322 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 ST8SIA4Q92187 359 aa13.56□□□□□ -0.24
SNX13-204ENST00000444712 IGKV1-27A0A075B6S5 117 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 GIPP09681 153 aaPredicted RBP13.55□□□□□ -0.24
SNX13-204ENST00000444712 SDHBP21912 280 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 PDZK1IP1Q13113 114 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 C4orf46Q504U0 113 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 RPUSD3Q6P087 351 aaKnown RBP13.55□□□□□ -0.24
SNX13-204ENST00000444712 MDP1Q86V88 176 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 TMEM17Q86X19 198 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 ZDHHC23Q8IYP9 409 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 C1orf162Q8NEQ5 155 aaPredicted RBP13.55□□□□□ -0.24
SNX13-204ENST00000444712 SLC30A7Q8NEW0 376 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 ZNF431Q8TF32 576 aaPredicted RBP13.55□□□□□ -0.24
SNX13-204ENST00000444712 SNAPC3Q92966 411 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 PAPOLGQ9BWT3 736 aaKnown RBP13.55□□□□□ -0.24
SNX13-204ENST00000444712 GON7Q9BXV9 100 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 POFUT1Q9H488 388 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 DLL4Q9NR61 685 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 RTTNQ86VV8 2226 aa13.55□□□□□ -0.24
SNX13-204ENST00000444712 ZNF850A8MQ14 1090 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 NKPD1Q17RQ9 610 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 ACSF3Q4G176 576 aaPredicted RBP13.54□□□□□ -0.24
SNX13-204ENST00000444712 OR52W1Q6IF63 320 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 CD163Q86VB7 1156 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 HOGA1Q86XE5 327 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 SAXO1Q8IYX7 474 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 ASCC1Q8N9N2 400 aaKnown RBP13.54□□□□□ -0.24
SNX13-204ENST00000444712 BOD1Q96IK1 185 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 TMEM246Q9BRR3 403 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 PLEKHJ1Q9NW61 149 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 SPRY1O43609 319 aaPredicted RBP13.54□□□□□ -0.24
SNX13-204ENST00000444712 CRYABP02511 175 aaKnown RBP13.54□□□□□ -0.24
SNX13-204ENST00000444712 CCL2P13500 99 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 HOXC12P31275 282 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 RAP2BP61225 183 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 IFITM2Q01629 132 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 PRDX4Q13162 271 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 NDUFA5Q16718 116 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 FAHD2BQ6P2I3 314 aaPredicted RBP13.54□□□□□ -0.24
SNX13-204ENST00000444712 INO80CQ6PI98 192 aaPredicted RBP13.54□□□□□ -0.24
SNX13-204ENST00000444712 NCCRP1Q6ZVX7 275 aaPredicted RBP13.54□□□□□ -0.24
SNX13-204ENST00000444712 OSR2Q8N2R0 312 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 OR13C8Q8NGS7 320 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 OR5H2Q8NGV7 314 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 FAHD2AQ96GK7 314 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 MS4A3Q96HJ5 214 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 SCGB3A2Q96PL1 93 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 HIST1H2AAQ96QV6 131 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 STARD10Q9Y365 291 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 DOCK7Q96N67 2140 aa13.54□□□□□ -0.24
SNX13-204ENST00000444712 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
SNX13-204ENST00000444712 PRSS44E7EML9 344 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 ANGPTL7O43827 346 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 RAD51DO75771 328 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 CSN2P05814 226 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 OR4E1P0C645 316 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 AMY2BP19961 511 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 IGHV1-2P23083 117 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 GABRR1P24046 479 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 DNASE1P24855 282 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 MPPED2Q15777 294 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 EIF2S3LQ2VIR3 472 aaKnown RBP13.53□□□□□ -0.24
SNX13-204ENST00000444712 CEACAM21Q3KPI0 293 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 ATPAF1Q5TC12 328 aaPredicted RBP13.53□□□□□ -0.24
SNX13-204ENST00000444712 NSUN5P2Q63ZY6 315 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 GCNT2Q8N0V5 402 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 CNEP1R1Q8N9A8 125 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 OR5M9Q8NGP3 310 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 FBXW5Q969U6 566 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 EDARQ9UNE0 448 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 MPC1Q9Y5U8 109 aa13.53□□□□□ -0.24
SNX13-204ENST00000444712 FREM2Q5SZK8 3169 aa13.52□□□□□ -0.24
SNX13-204ENST00000444712 PQLC2LA1A4F0 135 aa13.52□□□□□ -0.24
SNX13-204ENST00000444712 ANKRD30BLA7E2S9 258 aa13.52□□□□□ -0.24
SNX13-204ENST00000444712 SMLR1H3BR10 107 aa13.52□□□□□ -0.24
SNX13-204ENST00000444712 H3BUI4 141 aa13.52□□□□□ -0.24
SNX13-204ENST00000444712 GSTT2P0CG29 244 aa13.52□□□□□ -0.24
SNX13-204ENST00000444712 OR3A3P47888 321 aa13.52□□□□□ -0.24
SNX13-204ENST00000444712 PRSS12P56730 875 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms