RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 KIF26BQ2KJY2 2108 aa9.4□□□□□ -0.9
TOP3B-210ENST00000444502 GLIPR1L1Q6UWM5 242 aa9.4□□□□□ -0.9
TOP3B-210ENST00000444502 ADGRE4PQ86SQ3 457 aa9.4□□□□□ -0.9
TOP3B-210ENST00000444502 OR4C16Q8NGL9 310 aa9.4□□□□□ -0.9
TOP3B-210ENST00000444502 OR4C45A6NMZ5 311 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 DLL1O00548 723 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 GALR2O43603 387 aaPredicted RBP9.4□□□□□ -0.91
TOP3B-210ENST00000444502 HPP00738 406 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 ITGB2P05107 769 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 GAS1P54826 345 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 ACTBL2Q562R1 376 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 CISD2Q8N5K1 135 aaKnown RBP9.4□□□□□ -0.91
TOP3B-210ENST00000444502 HGDQ93099 445 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 ATG101Q9BSB4 218 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 TMEM59Q9BXS4 323 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 EXOSC3Q9NQT5 275 aaKnown RBP9.4□□□□□ -0.91
TOP3B-210ENST00000444502 FOXJ2Q9P0K8 574 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 PROCRQ9UNN8 238 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 R4GMQ9 66 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 MPDZO75970 2070 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 PLXNB3Q9ULL4 1909 aa9.4□□□□□ -0.91
TOP3B-210ENST00000444502 C21orf140B9A014 251 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 EFSO43281 561 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 IFNA17P01571 189 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 HLA-HP01893 362 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 CCL2P13500 99 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 RAB6AP20340 208 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 IKZF1Q13422 519 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 NR2C2APQ86WQ0 139 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 DEFB108BQ8NET1 73 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 STEAP2Q8NFT2 490 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 CPNE4Q96A23 557 aaPredicted RBP9.39□□□□□ -0.91
TOP3B-210ENST00000444502 FOXRED1Q96CU9 486 aaPredicted RBP9.39□□□□□ -0.91
TOP3B-210ENST00000444502 SLC25A32Q9H2D1 315 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 GDF2Q9UK05 429 aaPredicted RBP9.39□□□□□ -0.91
TOP3B-210ENST00000444502 FOXJ3Q9UPW0 622 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 A0A087WZY1 265 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 B4E171 279 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 PYCARD-AS1I3L0S3 204 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 LYZL6O75951 148 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 BLVRBP30043 206 aaPredicted RBP9.39□□□□□ -0.91
TOP3B-210ENST00000444502 TSPAN7P41732 249 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 P2RY4P51582 365 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 SLC9A3R2Q15599 337 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 RHOUQ7L0Q8 258 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 SLC22A24Q8N4F4 322 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 ARL6IP6Q8N6S5 226 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 PARP12Q9H0J9 701 aaKnown RBP9.39□□□□□ -0.91
TOP3B-210ENST00000444502 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 A0A0B4J2A0 478 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 DIRAS3O95661 229 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 CD96P40200 585 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 EXOSC6Q5RKV6 272 aaKnown RBP9.39□□□□□ -0.91
TOP3B-210ENST00000444502 SLC22A25Q6T423 547 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 ZNF561Q8N587 486 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 OR4S1Q8NGB4 309 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 OR51A2Q8NGJ7 313 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 TMED6Q8WW62 240 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 FGF11Q92914 225 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 CMBLQ96DG6 245 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 ZNF649Q9BS31 505 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 EIF5A2Q9GZV4 153 aaKnown RBP9.39□□□□□ -0.91
TOP3B-210ENST00000444502 TMPRSS5Q9H3S3 457 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 KCNIP1Q9NZI2 227 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 SHPKQ9UHJ6 478 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 LHX6Q9UPM6 363 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 TECTAO75443 2155 aa9.39□□□□□ -0.91
TOP3B-210ENST00000444502 ZNF729A6NN14 1252 aaPredicted RBP9.38□□□□□ -0.91
TOP3B-210ENST00000444502 PIN1P1O15428 100 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 BGLAPP02818 100 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 ASAH2BP0C7U1 165 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 CD80P33681 288 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 VAMP2P63027 116 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 EGR4Q05215 589 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 ALKBH6Q3KRA9 238 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 OR2W3Q7Z3T1 314 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 CDC20BQ86Y33 519 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 RNF128Q8TEB7 428 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 ABHD3Q8WU67 409 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 SCGB3A2Q96PL1 93 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 FOXB1Q99853 325 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 HES7Q9BYE0 225 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 NGBQ9NPG2 151 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 AUP1Q9Y679 476 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 URGCP-MRPS24S4R325 110 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 A0A087WV48 116 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 MEX3AA1L020 520 aaKnown RBP9.38□□□□□ -0.91
TOP3B-210ENST00000444502 SLC17A2O00624 439 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 GP1BAP07359 652 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 FGF5P12034 268 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 ZNF25P17030 456 aaPredicted RBP9.38□□□□□ -0.91
TOP3B-210ENST00000444502 TNFSF4P23510 183 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 EFNB1P98172 346 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
TOP3B-210ENST00000444502 RNF151Q2KHN1 245 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 GABRG1Q8N1C3 465 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 FAM181AQ8N9Y4 354 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 ABHD5Q8WTS1 349 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 PBOV1Q9GZY1 135 aa9.38□□□□□ -0.91
TOP3B-210ENST00000444502 TLNRD1Q9H1K6 362 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms