RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 CHAF1BQ13112 559 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 UNQ6126/PRO20091Q6UXV3 157 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 TFAP2EQ6VUC0 442 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 ZSCAN4Q8NAM6 433 aaPredicted RBP13.97□□□□□ -0.17
SHQ1-202ENST00000444040 STOML3Q8TAV4 291 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 SLC39A7Q92504 469 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 DCUN1D4Q92564 292 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 NECAB3Q96P71 396 aaPredicted RBP13.97□□□□□ -0.17
SHQ1-202ENST00000444040 ELL3Q9HB65 397 aaPredicted RBP13.97□□□□□ -0.17
SHQ1-202ENST00000444040 RTTNQ86VV8 2226 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 P04436 131 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 RFPL3SP0C7P2 107 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 LYL1P12980 280 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 CARD18P57730 90 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 PPA1Q15181 289 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 ZNF774Q6NX45 483 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 SPERTQ8NA61 448 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 KCNE4Q8WWG9 221 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 MICU1Q9BPX6 476 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 FAM117AQ9C073 453 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 TMEM38BQ9NVV0 291 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 MSTNO14793 375 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 IGHEP01854 428 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 SURF2Q15527 256 aaPredicted RBP13.96□□□□□ -0.17
SHQ1-202ENST00000444040 ELP2Q6IA86 826 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 RTL6Q6ICC9 239 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 BHLHE23Q8NDY6 225 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 OR14L1PQ8NHC6 308 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 ADGRG7Q96K78 797 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 GLS2Q9UI32 602 aa13.96□□□□□ -0.17
SHQ1-202ENST00000444040 KIAA1549Q9HCM3 1950 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 LRRC3CA6NJW4 275 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 B4E171 279 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 LAMTOR5O43504 91 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 TSPAN7P41732 249 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 MTCP1P56278 107 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 KRTAP27-1Q3LI81 207 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 CHRFAM7AQ494W8 412 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 ZBTB44Q8NCP5 570 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 OR1F12Q8NHA8 337 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 CPT1CQ8TCG5 803 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 EMG1Q92979 244 aaKnown RBP13.96□□□□□ -0.18
SHQ1-202ENST00000444040 SPSB1Q96BD6 273 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 REEP6Q96HR9 211 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 OR10C1Q96KK4 312 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 CYTL1Q9NRR1 136 aa13.96□□□□□ -0.18
SHQ1-202ENST00000444040 FRYLO94915 3013 aa13.95□□□□□ -0.18
SHQ1-202ENST00000444040 IGKV1-27A0A075B6S5 117 aa13.95□□□□□ -0.18
SHQ1-202ENST00000444040 GABRR1P24046 479 aa13.95□□□□□ -0.18
SHQ1-202ENST00000444040 IL15RAQ13261 267 aa13.95□□□□□ -0.18
SHQ1-202ENST00000444040 LDAHQ9H6V9 325 aa13.95□□□□□ -0.18
SHQ1-202ENST00000444040 TAS2R3Q9NYW6 316 aa13.95□□□□□ -0.18
SHQ1-202ENST00000444040 TCFL5Q9UL49 500 aa13.95□□□□□ -0.18
SHQ1-202ENST00000444040 OR6C6A6NF89 314 aa13.95□□□□□ -0.18
SHQ1-202ENST00000444040 CXCL13O43927 109 aa13.95□□□□□ -0.18
SHQ1-202ENST00000444040 TMEM225BP0DP42 221 aa13.95□□□□□ -0.18
SHQ1-202ENST00000444040 CLDN15P56746 228 aa13.95□□□□□ -0.18
SHQ1-202ENST00000444040 RPUSD3Q6P087 351 aaKnown RBP13.95□□□□□ -0.18
SHQ1-202ENST00000444040 ALKBH3Q96Q83 286 aaPredicted RBP13.95□□□□□ -0.18
SHQ1-202ENST00000444040 HDHD3Q9BSH5 251 aaPredicted RBP13.95□□□□□ -0.18
SHQ1-202ENST00000444040 ZNF701Q9NV72 531 aaPredicted RBP13.95□□□□□ -0.18
SHQ1-202ENST00000444040 PLEKHJ1Q9NW61 149 aa13.95□□□□□ -0.18
SHQ1-202ENST00000444040 RRP8O43159 456 aaKnown RBP13.94□□□□□ -0.18
SHQ1-202ENST00000444040 SERPINA5P05154 406 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 PATE4P0C8F1 98 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 ICAM2P13598 275 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 ZNF32P17041 273 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 OTX2P32243 289 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 ABLIM2Q6H8Q1 611 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 H3F3CQ6NXT2 135 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 PRSS54Q6PEW0 395 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 SLC23A3Q6PIS1 610 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 SLC30A7Q8NEW0 376 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 DEPPQ9NTK1 212 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 RYDENQ9NUL5 291 aaKnown RBP13.94□□□□□ -0.18
SHQ1-202ENST00000444040 OR5AC2Q9NZP5 309 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 MSGN1A6NI15 193 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 FGF16O43320 207 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 ANGPTL7O43827 346 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 B4GALT1P15291 398 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 NAAAQ02083 359 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 SCRN3Q0VDG4 424 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 ZNF528Q3MIS6 628 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 AAED1Q7RTV5 226 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 POC1AQ8NBT0 407 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 LHFPL5Q8TAF8 219 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 METTL9Q9H1A3 318 aa13.94□□□□□ -0.18
SHQ1-202ENST00000444040 PMS2P1A4D2B8 440 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 SPRY1O43609 319 aaPredicted RBP13.93□□□□□ -0.18
SHQ1-202ENST00000444040 PTGER4P35408 488 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 PRSS12P56730 875 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 NKAPLQ5M9Q1 402 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 MYO7BQ6PIF6 2116 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 ATRAIDQ6UW56 229 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 OR10D3Q8NH80 312 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 AKR7LQ8NHP1 331 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 C2orf50Q96LR7 162 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 DECR2Q9NUI1 292 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 ZNF581Q9P0T4 197 aa13.93□□□□□ -0.18
SHQ1-202ENST00000444040 PADI1Q9ULC6 663 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms