RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 EMG1Q92979 244 aaKnown RBP17.87■□□□□ 0.45
SHOX2-203ENST00000441443 KLHDC7BQ96G42 594 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 PRO1933Q9H354 126 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 PARPBPQ9NWS1 579 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 RFNGQ9Y644 331 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 SLC6A8P48029 635 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 FAM213BQ8TBF2 198 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 NUDT16L1Q9BRJ7 211 aaKnown RBP17.87■□□□□ 0.45
SHOX2-203ENST00000441443 CXCL1P09341 107 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 CHATP28329 748 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 RAB1AP62820 205 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 GAMTQ14353 236 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 PLXDC2Q6UX71 529 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 OR5AS1Q8N127 324 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 SUMF2Q8NBJ7 301 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 PTPMT1Q8WUK0 201 aaPredicted RBP17.86■□□□□ 0.45
SHOX2-203ENST00000441443 MUCL1Q96DR8 90 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 GPR61Q9BZJ8 451 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 ZNF701Q9NV72 531 aaPredicted RBP17.86■□□□□ 0.45
SHOX2-203ENST00000441443 KIR2DS5A0A0G2JLQ3 304 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 A0A0G2JNG1 304 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 KIR2DS3K7RE56 304 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 SEC11BP0C7V7 166 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 GLI4P10075 376 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 KIR2DS5Q14953 304 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 SP6Q3SY56 376 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 CHRFAM7AQ494W8 412 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 C19orf47Q8N9M1 422 aaKnown RBP17.86■□□□□ 0.45
SHOX2-203ENST00000441443 CCDC54Q8NEL0 328 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 ZDHHC12Q96GR4 267 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 FAM71F1Q96KD3 344 aaPredicted RBP17.86■□□□□ 0.45
SHOX2-203ENST00000441443 EMC6Q9BV81 110 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.86■□□□□ 0.45
SHOX2-203ENST00000441443 FBLN5Q9UBX5 448 aa17.86■□□□□ 0.45
SHOX2-203ENST00000441443 IGKV1D-8A0A087WSZ0 117 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 ZNF878C9JN71 531 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 KIAA0895LQ68EN5 471 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 TMEM182Q6ZP80 229 aaPredicted RBP17.85■□□□□ 0.45
SHOX2-203ENST00000441443 ABHD12BQ7Z5M8 362 aaPredicted RBP17.85■□□□□ 0.45
SHOX2-203ENST00000441443 PRSS58Q8IYP2 241 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 APCDD1LQ8NCL9 501 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 OR51T1Q8NGJ9 327 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 LRRC61Q9BV99 259 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 PBDC1Q9BVG4 233 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 HS3ST3A1Q9Y663 406 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 IFNA21P01568 189 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 NDUFB7P17568 137 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 IL12BP29460 328 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 CDCP2Q5VXM1 449 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 ZNF248Q8NDW4 579 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 OR10S1Q8NGN2 331 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 LMX1AQ8TE12 382 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 NPRL2Q8WTW4 380 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 DAZLQ92904 295 aaKnown RBP17.85■□□□□ 0.45
SHOX2-203ENST00000441443 NTNG2Q96CW9 530 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 TBL1XR1Q9BZK7 514 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 TGIF2Q9GZN2 237 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 ZDHHC8Q9ULC8 765 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 PHF3Q92576 2039 aaKnown RBP17.85■□□□□ 0.45
SHOX2-203ENST00000441443 RTTNQ86VV8 2226 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 ZNF205O95201 554 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 AHSA1O95433 338 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 MBPP02686 304 aaPredicted RBP17.85■□□□□ 0.45
SHOX2-203ENST00000441443 MAS1LP35410 378 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 RSU1Q15404 277 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 SURF2Q15527 256 aaPredicted RBP17.85■□□□□ 0.45
SHOX2-203ENST00000441443 Q8WTZ3 238 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 C11orf40Q8WZ69 217 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 TUBD1Q9UJT1 453 aa17.85■□□□□ 0.45
SHOX2-203ENST00000441443 BORCS7-ASMTA0A0B4J1R7 106 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 NPIPA5E9PKD4 350 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 NPIPB7O75200 414 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 SOD3P08294 240 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 HIST1H1BP16401 226 aaKnown RBP17.84■□□□□ 0.45
SHOX2-203ENST00000441443 PGCP20142 388 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 RBP2P50120 134 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 GFERP55789 205 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 CCL20P78556 96 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 NHLH2Q02577 135 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 PRTGQ2VWP7 1150 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 ZNF610Q8N9Z0 462 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 SMRP1Q8NCR6 262 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 RHBDD1Q8TEB9 315 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 ARV1Q9H2C2 271 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 C8orf33Q9H7E9 229 aaPredicted RBP17.84■□□□□ 0.45
SHOX2-203ENST00000441443 NPIPA1Q9UND3 350 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 PCDH15Q96QU1 1955 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 KLK2P20151 261 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 DEGS2Q6QHC5 323 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 SULF2Q8IWU5 870 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 SGPP2Q8IWX5 399 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 REEP6Q96HR9 211 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 S100A13Q99584 98 aa17.84■□□□□ 0.45
SHOX2-203ENST00000441443 ZNF2Q9BSG1 426 aaPredicted RBP17.84■□□□□ 0.45
SHOX2-203ENST00000441443 HIST1H2BKO60814 126 aa17.83■□□□□ 0.45
SHOX2-203ENST00000441443 HIST1H2BJP06899 126 aa17.83■□□□□ 0.45
SHOX2-203ENST00000441443 HIST1H2BOP23527 126 aa17.83■□□□□ 0.45
SHOX2-203ENST00000441443 HIST1H2BBP33778 126 aa17.83■□□□□ 0.45
SHOX2-203ENST00000441443 TAGLN2P37802 199 aaKnown RBP17.83■□□□□ 0.45
SHOX2-203ENST00000441443 HIST1H2BDP58876 126 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms