RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 CDK10Q15131 360 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR7A5Q15622 319 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 BCL2A1Q16548 175 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 MRGPRG-AS1Q2M3A8 158 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 MS4A18Q3C1V0 323 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC25A53Q5H9E4 307 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 WDR38Q5JTN6 314 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 TEX30Q5JUR7 227 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM69BQ5VUD6 431 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 TIGD3Q6B0B8 471 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR5M10Q6IEU7 315 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 PWWP2BQ6NUJ5 590 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM199XQ6PEV8 388 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 TMEM205Q6UW68 189 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF704Q6ZNC4 412 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 C16orf47Q6ZP98 133 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC35D2Q76EJ3 337 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 BTN2A1Q7KYR7 527 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 CPEB2Q7Z5Q1 589 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF679Q8IYX0 411 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 DND1Q8IYX4 353 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 PRSS35Q8N3Z0 413 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 NEXN-AS1Q8NBZ9 246 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 APCDD1LQ8NCL9 501 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR2G2Q8NGZ5 317 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 SYNPRQ8TBG9 265 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC22A8Q8TCC7 542 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 RNF128Q8TEB7 428 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 RNF138Q8WVD3 245 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 SMIM4Q8WVI0 70 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 TSEN15Q8WW01 171 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 FCAMRQ8WWV6 532 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 HSD17B8Q92506 261 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 RND1Q92730 232 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLAMF9Q96A28 289 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 UPRTQ96BW1 309 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 C8orf44Q96CB5 159 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 NXPE2Q96DL1 559 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 FBXO17Q96EF6 278 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 DNAJA3Q96EY1 480 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 SCMH1Q96GD3 660 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 C4orf45Q96LM5 186 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 RBP7Q96R05 134 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR2M2Q96R28 347 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 AMELYQ99218 206 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 TRAF4Q9BUZ4 470 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 DEFB126Q9BYW3 111 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 POTEKPQ9BYX7 375 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR11A1Q9GZK7 315 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 ACTR6Q9GZN1 396 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 MED28Q9H204 178 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC26A1Q9H2B4 701 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLA2Q9H6Q3 261 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 NIPAL2Q9H841 368 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 PLEKHA1Q9HB21 404 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 CHST11Q9NPF2 352 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 SERINC1Q9NRX5 453 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 MRPL22Q9NWU5 206 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 P4HTMQ9NXG6 502 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 STMN3Q9NZ72 180 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 KLRF1Q9NZS2 232 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 KLHL9Q9P2J3 617 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR5V1Q9UGF6 321 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 IL19Q9UHD0 177 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 NXT1Q9UKK6 140 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 RNF150Q9ULK6 438 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 NPIPA1Q9UND3 350 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 ING4Q9UNL4 249 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 FOXJ3Q9UPW0 622 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 RBMX2Q9Y388 322 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 ETV7Q9Y603 341 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 U3KQA8 63 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 MDC1Q14676 2089 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 ATG2BQ96BY7 2078 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 TRAV6A0A075B6T7 132 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 TRAV8-7A0A075B6U6 113 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 IGLV3-32A0A0A0MS00 114 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 A0A1W2PQ72 361 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR2M5A3KFT3 312 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 C7orf66A4D0T2 115 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 PRAC2D3DTV9 90 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 GABARAPH6UMI1 98 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 EFNA2O43921 213 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 PRAF2O60831 178 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 RBBP9O75884 186 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR2J2O76002 312 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 KRT33AO76009 404 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 AQP8O94778 261 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 GLSO94925 669 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 CRYAAP02489 173 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 C1QBP02746 253 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 MT-ND4P03905 459 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 CD2P06729 351 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 CSN3P07498 182 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 H2BFMP0C1H6 154 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 GSTT2P0CG29 244 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 HLA-DOBP13765 273 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 PSMB1P20618 241 aaKnown RBP2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 S100A1P23297 94 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 GIFP27352 417 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms