RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 PTGFRP43088 359 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 CLDN15P56746 228 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 LPCAT3Q6P1A2 487 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 AAED1Q7RTV5 226 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 TMEM123Q8N131 208 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 ZIC4Q8N9L1 334 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 GJC3Q8NFK1 279 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 OR8B12Q8NGG6 310 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 OR5D14Q8NGL3 314 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 ARL11Q969Q4 196 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 NTNG2Q96CW9 530 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 SEH1LQ96EE3 360 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 FER1L6-AS2Q96M78 137 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 CRLF2Q9HC73 371 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 PARD6AQ9NPB6 346 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 GPR84Q9NQS5 396 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 PIEZO2Q9H5I5 2752 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 CSN2P05814 226 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 CELA3AP09093 270 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 IGFBP3P17936 291 aaPredicted RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 SNRPEP62304 92 aaKnown RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 FOXO1Q12778 655 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 SULF2Q8IWU5 870 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 TMEM229BQ8NBD8 167 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 INO80EQ8NBZ0 244 aaPredicted RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 OR5AP2Q8NGF4 316 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 OR4A4PQ8NGN8 299 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 ABHD3Q8WU67 409 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 PGAM5Q96HS1 289 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 COL25A1Q9BXS0 654 aaPredicted RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 MBD2Q9UBB5 411 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 FLVCR1Q9Y5Y0 555 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 NCOA6Q14686 2063 aaPredicted RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 ATMQ13315 3056 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 OR5H15A6NDH6 313 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 ABOP16442 354 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 GRB2P62993 217 aaKnown RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 SSBP1Q04837 148 aaKnown RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 DMRTC1Q5HYR2 192 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 RBMS3Q6XE24 437 aaKnown RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 GPR137CQ8N3F9 429 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 TMEM54Q969K7 222 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 SPACA5Q96QH8 159 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 SOX7Q9BT81 388 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 SF3B5Q9BWJ5 86 aaKnown RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 MOB1AQ9H8S9 216 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 ZMAT3Q9HA38 289 aaKnown RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 DNAJC13O75165 2243 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 ARGFXA6NJG6 315 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 TERTO14746 1132 aaKnown RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 DNPH1O43598 174 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 IGHV3-9P01782 118 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 ZNF735P0CB33 412 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 MAGEA5P43359 124 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 LSM6P62312 80 aaKnown RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 PLXDC2Q6UX71 529 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 GALNTL5Q7Z4T8 443 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 NAA40Q86UY6 237 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 BPIFB2Q8N4F0 458 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 NKAIN3Q8N8D7 197 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 ADAMTS17Q8TE56 1095 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 FAM46BQ96A09 425 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 MYOZ1Q9NP98 299 aaPredicted RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 PNRC2Q9NPJ4 139 aaKnown RBP12.41□□□□□ -0.42
LIMD1-202ENST00000440097 GSN-AS1Q9NRJ2 163 aa12.41□□□□□ -0.42
LIMD1-202ENST00000440097 FTH1P19P0C7X4 201 aa12.4□□□□□ -0.42
LIMD1-202ENST00000440097 CD79AP11912 226 aa12.4□□□□□ -0.42
LIMD1-202ENST00000440097 CBR1P16152 277 aa12.4□□□□□ -0.42
LIMD1-202ENST00000440097 KCNMB1Q16558 191 aa12.4□□□□□ -0.42
LIMD1-202ENST00000440097 C10orf128Q5T292 105 aa12.4□□□□□ -0.42
LIMD1-202ENST00000440097 OR52N4Q8NGI2 321 aa12.4□□□□□ -0.42
LIMD1-202ENST00000440097 OR13C8Q8NGS7 320 aa12.4□□□□□ -0.42
LIMD1-202ENST00000440097 CPNE2Q96FN4 548 aaPredicted RBP12.4□□□□□ -0.42
LIMD1-202ENST00000440097 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.42
LIMD1-202ENST00000440097 ZNF319Q9P2F9 582 aa12.4□□□□□ -0.42
LIMD1-202ENST00000440097 VSIG4Q9Y279 399 aa12.4□□□□□ -0.42
LIMD1-202ENST00000440097 ZNF407Q9C0G0 2248 aa12.4□□□□□ -0.42
LIMD1-202ENST00000440097 LOC100509620A0A075B734 347 aa12.4□□□□□ -0.43
LIMD1-202ENST00000440097 FARS2O95363 451 aaKnown RBP12.4□□□□□ -0.43
LIMD1-202ENST00000440097 B4GALT1P15291 398 aa12.4□□□□□ -0.43
LIMD1-202ENST00000440097 NKPD1Q17RQ9 610 aa12.4□□□□□ -0.43
LIMD1-202ENST00000440097 RHOUQ7L0Q8 258 aa12.4□□□□□ -0.43
LIMD1-202ENST00000440097 ADGRE4PQ86SQ3 457 aa12.4□□□□□ -0.43
LIMD1-202ENST00000440097 OR4D6Q8NGJ1 314 aa12.4□□□□□ -0.43
LIMD1-202ENST00000440097 CPNE4Q96A23 557 aaPredicted RBP12.4□□□□□ -0.43
LIMD1-202ENST00000440097 PIK3IP1Q96FE7 263 aa12.4□□□□□ -0.43
LIMD1-202ENST00000440097 IP6K3Q96PC2 410 aa12.4□□□□□ -0.43
LIMD1-202ENST00000440097 SLC6A7Q99884 636 aa12.4□□□□□ -0.43
LIMD1-202ENST00000440097 SEC11CQ9BY50 192 aa12.4□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF703Q9H7S9 590 aaPredicted RBP12.4□□□□□ -0.43
LIMD1-202ENST00000440097 CNTD2Q9H8S5 307 aa12.4□□□□□ -0.43
LIMD1-202ENST00000440097 UQCC1Q9NVA1 299 aa12.4□□□□□ -0.43
LIMD1-202ENST00000440097 ZNF705EA8MWA4 302 aaPredicted RBP12.39□□□□□ -0.43
LIMD1-202ENST00000440097 PGAM2P15259 253 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 ENDOGQ14249 297 aaKnown RBP12.39□□□□□ -0.43
LIMD1-202ENST00000440097 HABP2Q14520 560 aaPredicted RBP12.39□□□□□ -0.43
LIMD1-202ENST00000440097 C20orf196Q8IYI0 205 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 TMED6Q8WW62 240 aa12.39□□□□□ -0.43
LIMD1-202ENST00000440097 INTS12Q96CB8 462 aaKnown RBP12.39□□□□□ -0.43
LIMD1-202ENST00000440097 TTTY12Q9BZ98 90 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms