RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 MSR1P21757 451 aa13.46□□□□□ -0.26
APP-208ENST00000439274 THBS4P35443 961 aa13.46□□□□□ -0.26
APP-208ENST00000439274 CAV2P51636 162 aa13.46□□□□□ -0.26
APP-208ENST00000439274 FAM189A2Q15884 450 aa13.46□□□□□ -0.26
APP-208ENST00000439274 CLEC9AQ6UXN8 241 aa13.46□□□□□ -0.26
APP-208ENST00000439274 UCN2Q96RP3 112 aa13.46□□□□□ -0.26
APP-208ENST00000439274 PARP12Q9H0J9 701 aaKnown RBP13.46□□□□□ -0.26
APP-208ENST00000439274 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.46□□□□□ -0.26
APP-208ENST00000439274 DNAJB11Q9UBS4 358 aa13.46□□□□□ -0.26
APP-208ENST00000439274 KLF2Q9Y5W3 355 aaPredicted RBP13.46□□□□□ -0.26
APP-208ENST00000439274 VPS13AQ96RL7 3174 aa13.45□□□□□ -0.26
APP-208ENST00000439274 NUDT19A8MXV4 375 aa13.45□□□□□ -0.26
APP-208ENST00000439274 G3V3Y1 287 aa13.45□□□□□ -0.26
APP-208ENST00000439274 DKK1O94907 266 aa13.45□□□□□ -0.26
APP-208ENST00000439274 SFTA3P0C7M3 94 aa13.45□□□□□ -0.26
APP-208ENST00000439274 RBMXP38159 391 aaKnown RBP13.45□□□□□ -0.26
APP-208ENST00000439274 FADS6Q8N9I5 356 aa13.45□□□□□ -0.26
APP-208ENST00000439274 C2CD4CQ8TF44 421 aa13.45□□□□□ -0.26
APP-208ENST00000439274 RBM24Q9BX46 236 aaKnown RBP13.45□□□□□ -0.26
APP-208ENST00000439274 CNTNAP3Q9BZ76 1288 aa13.45□□□□□ -0.26
APP-208ENST00000439274 GPR173Q9NS66 373 aa13.45□□□□□ -0.26
APP-208ENST00000439274 HDGFL3Q9Y3E1 203 aa13.45□□□□□ -0.26
APP-208ENST00000439274 CHCHD2Q9Y6H1 151 aaPredicted RBP13.45□□□□□ -0.26
APP-208ENST00000439274 V9GYS6 101 aa13.45□□□□□ -0.26
APP-208ENST00000439274 A0A1W2PQM1 296 aa13.45□□□□□ -0.26
APP-208ENST00000439274 SERPINE3A8MV23 424 aa13.45□□□□□ -0.26
APP-208ENST00000439274 RNASEK-C17orf49H0YIS7 233 aa13.45□□□□□ -0.26
APP-208ENST00000439274 TLX3O43711 291 aaPredicted RBP13.45□□□□□ -0.26
APP-208ENST00000439274 ANGPTL7O43827 346 aa13.45□□□□□ -0.26
APP-208ENST00000439274 GUCA1AP43080 201 aaPredicted RBP13.45□□□□□ -0.26
APP-208ENST00000439274 ALDH3B1P43353 468 aa13.45□□□□□ -0.26
APP-208ENST00000439274 RRADP55042 308 aa13.45□□□□□ -0.26
APP-208ENST00000439274 SLC35A1P78382 337 aa13.45□□□□□ -0.26
APP-208ENST00000439274 SNAI3Q3KNW1 292 aa13.45□□□□□ -0.26
APP-208ENST00000439274 SHEQ5VZ18 495 aa13.45□□□□□ -0.26
APP-208ENST00000439274 ZNF385CQ66K41 422 aaPredicted RBP13.45□□□□□ -0.26
APP-208ENST00000439274 ZFP82Q8N141 532 aa13.45□□□□□ -0.26
APP-208ENST00000439274 MRPL24Q96A35 216 aaKnown RBP13.45□□□□□ -0.26
APP-208ENST00000439274 NABP1Q96AH0 204 aa13.45□□□□□ -0.26
APP-208ENST00000439274 ZNF837Q96EG3 531 aaPredicted RBP13.45□□□□□ -0.26
APP-208ENST00000439274 PIGQQ9BRB3 760 aa13.45□□□□□ -0.26
APP-208ENST00000439274 CHST5Q9GZS9 411 aa13.45□□□□□ -0.26
APP-208ENST00000439274 NELFAQ9H3P2 528 aa13.45□□□□□ -0.26
APP-208ENST00000439274 LIME1Q9H400 295 aa13.45□□□□□ -0.26
APP-208ENST00000439274 PLEKHJ1Q9NW61 149 aa13.45□□□□□ -0.26
APP-208ENST00000439274 FBXL17Q9UF56 701 aa13.45□□□□□ -0.26
APP-208ENST00000439274 RARRES3Q9UL19 164 aa13.45□□□□□ -0.26
APP-208ENST00000439274 LSM5Q9Y4Y9 91 aaKnown RBP13.45□□□□□ -0.26
APP-208ENST00000439274 SCGB1D2O95969 90 aa13.44□□□□□ -0.26
APP-208ENST00000439274 CPT2P23786 658 aa13.44□□□□□ -0.26
APP-208ENST00000439274 CTSSP25774 331 aa13.44□□□□□ -0.26
APP-208ENST00000439274 RPL12P30050 165 aaKnown RBP13.44□□□□□ -0.26
APP-208ENST00000439274 RAB13P51153 203 aa13.44□□□□□ -0.26
APP-208ENST00000439274 CHAF1BQ13112 559 aa13.44□□□□□ -0.26
APP-208ENST00000439274 ZNF528Q3MIS6 628 aa13.44□□□□□ -0.26
APP-208ENST00000439274 AKIRIN2Q53H80 203 aa13.44□□□□□ -0.26
APP-208ENST00000439274 SULF2Q8IWU5 870 aa13.44□□□□□ -0.26
APP-208ENST00000439274 GJC3Q8NFK1 279 aa13.44□□□□□ -0.26
APP-208ENST00000439274 RXFP4Q8TDU9 374 aa13.44□□□□□ -0.26
APP-208ENST00000439274 SLC25A43Q8WUT9 341 aaPredicted RBP13.44□□□□□ -0.26
APP-208ENST00000439274 HAS2Q92819 552 aa13.44□□□□□ -0.26
APP-208ENST00000439274 SAT2Q96F10 170 aaPredicted RBP13.44□□□□□ -0.26
APP-208ENST00000439274 GNRHR2Q96P88 292 aa13.44□□□□□ -0.26
APP-208ENST00000439274 TM2D1Q9BX74 207 aa13.44□□□□□ -0.26
APP-208ENST00000439274 PCED1AQ9H1Q7 454 aa13.44□□□□□ -0.26
APP-208ENST00000439274 ESRP2Q9H6T0 727 aaKnown RBP13.44□□□□□ -0.26
APP-208ENST00000439274 C1orf123Q9NWV4 160 aa13.44□□□□□ -0.26
APP-208ENST00000439274 GHRLQ9UBU3 117 aa13.44□□□□□ -0.26
APP-208ENST00000439274 SDK2Q58EX2 2172 aa13.44□□□□□ -0.26
APP-208ENST00000439274 K7EPK0 472 aa13.44□□□□□ -0.26
APP-208ENST00000439274 PNLIPP16233 465 aa13.44□□□□□ -0.26
APP-208ENST00000439274 FCGR2CP31995 323 aa13.44□□□□□ -0.26
APP-208ENST00000439274 CD80P33681 288 aa13.44□□□□□ -0.26
APP-208ENST00000439274 RFC3P40938 356 aa13.44□□□□□ -0.26
APP-208ENST00000439274 LSM6P62312 80 aaKnown RBP13.44□□□□□ -0.26
APP-208ENST00000439274 CCL7P80098 99 aa13.44□□□□□ -0.26
APP-208ENST00000439274 PDZK1IP1Q13113 114 aa13.44□□□□□ -0.26
APP-208ENST00000439274 ETV3LQ6ZN32 361 aa13.44□□□□□ -0.26
APP-208ENST00000439274 SLC16A14Q7RTX9 510 aa13.44□□□□□ -0.26
APP-208ENST00000439274 FAM71E2Q8N5Q1 922 aa13.44□□□□□ -0.26
APP-208ENST00000439274 NAXEQ8NCW5 288 aa13.44□□□□□ -0.26
APP-208ENST00000439274 OR2AE1Q8NHA4 323 aa13.44□□□□□ -0.26
APP-208ENST00000439274 FNDC9Q8TBE3 224 aa13.44□□□□□ -0.26
APP-208ENST00000439274 DYRK2Q92630 601 aa13.44□□□□□ -0.26
APP-208ENST00000439274 CMSS1Q9BQ75 279 aaKnown RBP13.44□□□□□ -0.26
APP-208ENST00000439274 FAAP24Q9BTP7 215 aa13.44□□□□□ -0.26
APP-208ENST00000439274 ZFP57Q9NU63 452 aa13.44□□□□□ -0.26
APP-208ENST00000439274 MEMO1Q9Y316 297 aa13.44□□□□□ -0.26
APP-208ENST00000439274 FRYLO94915 3013 aa13.43□□□□□ -0.26
APP-208ENST00000439274 M0R135 149 aa13.43□□□□□ -0.26
APP-208ENST00000439274 SPRY1O43609 319 aaPredicted RBP13.43□□□□□ -0.26
APP-208ENST00000439274 CRYBA1P05813 215 aa13.43□□□□□ -0.26
APP-208ENST00000439274 CD63P08962 238 aa13.43□□□□□ -0.26
APP-208ENST00000439274 TMEM225BP0DP42 221 aa13.43□□□□□ -0.26
APP-208ENST00000439274 SPP1P10451 314 aa13.43□□□□□ -0.26
APP-208ENST00000439274 OPRM1P35372 400 aa13.43□□□□□ -0.26
APP-208ENST00000439274 ZNF84P51523 738 aa13.43□□□□□ -0.26
APP-208ENST00000439274 ZNF239Q16600 458 aaKnown RBP13.43□□□□□ -0.26
APP-208ENST00000439274 SP6Q3SY56 376 aa13.43□□□□□ -0.26
APP-208ENST00000439274 TMEM268Q5VZI3 342 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms